Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq19 150 2e-31 >seq19 Length=879724 Score = 150 bits (166), Expect = 2e-31 Identities = 478/734 (65%), Gaps = 14/734 (2%) Strand=Plus/Minus Query 12858 TTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATAT 12917 |||||||||| || | || | ||| ||||| || || ||||| |||| | || || Sbjct 584135 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 584076 Query 12918 TTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTT-TACACCCTAATTCTAGT 12976 | ||||||||||| || ||||| | | | ||| |||||| || | || | ||| | Sbjct 584075 TCTCCATAAAATCAAACGGATTGGTGGCATGATA-TATTTTGGTATAACCCAGTTCCTGC 584017 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 | | ||||||| ||||||||||| || |||||| ||| | | ||||| || || Sbjct 584016 AGCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATC 583957 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 | || |||| || ||||| | ||| | ||||| || || || || ||| | Sbjct 583956 AGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATA 583897 Query 13097 ATGTCTCTTATTACGTTCT--CTAATGGAGGATTTGATAGATGCTTAAACATCATACATG 13154 || | | || | || || | | |||| || ||| | | || || | Sbjct 583896 ATTCCATGAACGACTTCCTGGCTCA--GTTTATTTTTGAGCATTTTATAAAGCAGGCAGG 583839 Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214 |||| ||||| |||| || |||||||| || | ||| || ||| ||||| || | Sbjct 583838 CAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTG 583779 Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaa-aaTATT 13273 |||| || |||| |||||| | ||| || || | | || | | |||| || || || Sbjct 583778 GCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGAAGAAAATG 583720 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333 ||||| ||||| || || || | ||| | ||| || | |||| | ||| ||| Sbjct 583719 CCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAA------ATTTCCGCCCTCAATC 583666 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || ||||| | |||||||| || || || | | |||| || | || Sbjct 583665 CAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAAC 583606 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453 | | |||||| | | ||| |||||| ||||| |||| | ||| |||| Sbjct 583605 AGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCA 583546 Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513 || || || ||||||||| || ||||| ||||||||||| | || || | | ||| Sbjct 583545 GAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGT 583486 Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573 |||||| || | |||| | |||||| || || || |||||||| ||||||||| Sbjct 583485 ACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAA 583426 Query 13574 aaaGCAAGTATGTG 13587 ||||||||||| || Sbjct 583425 AAAGCAAGTATATG 583412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430928156420454