Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq426 136 9e-27 seq1288 86.0 1e-11 >seq426 Length=101737 Score = 136 bits (150), Expect = 9e-27 Identities = 162/218 (74%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| || ||||| || || | || || || ||||| || ||| Sbjct 90 GTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGTTGCTTGCCA 149 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || |||||||| | ||| || |||||||| || || || || || |||||||| | || Sbjct 150 GCGAAAATTAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGAATCTTAGTCTTG 209 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||||| | || ||||| || || || ||||| ||||| || || Sbjct 210 ACATTTTCGATAGTATCAGAACCCTCAACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTC 269 Query 104543 TTTACAAATATCTGCATTTTGTGTACAGTATTTATTAG 104580 |||||||| || ||||| |||| ||||| |||||| Sbjct 270 TTTACAAAGATTTGCAT----TGTA-AGTATATATTAG 302 >seq1288 Length=22276 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || |||||||| || || || || ||||| ||||| || || | | ||||| ||| Sbjct 528 GTCGCGTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGG 587 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 | ||||| | ||||| |||| || | || ||||| ||||| |||| ||| | ||| Sbjct 588 CTCAAGAAGCGCGGCCTCATGCACGGCCTCACCTTCTCGAACGAGCTGATCAGCCGCGAC 647 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || || | ||||||||||| || ||| Sbjct 648 GAGGGCCTCCACTGCGACTTTGCCTGT 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151246053080516