Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_005345.2 Length=49220 Score E Sequences producing significant alignments: (Bits) Value seq2836 100 9e-17 >seq2836 Length=10926 Score = 100 bits (110), Expect = 9e-17 Identities = 222/322 (69%), Gaps = 16/322 (5%) Strand=Plus/Minus Query 7425 GTTCGACCTCGAAACGACGGGCGTTGACGTCGAGCAGGACCGGATCGTGACCGCGGCAGC 7484 |||||| || || ||||| || || ||||||||| |||||| | |||||||| | | Sbjct 6599 GTTCGATCTGGAGACGACCGGAGTCGACGTCGAGTCGGACCGCGTGGTGACCGC--CTAC 6542 Query 7485 GATCGA---CCTCGGCGCCGA--GAAGCCCC-TCACG---CTGGAGTGGCTCGCCGACCC 7535 | ||| ||||| |||||| | || | || || | |||||| || ||||| Sbjct 6541 G-TCGGTATCCTCGACGCCGATGGCAGACAGGTCGCGGCCCGTTCGTGGCTTGCGGACCC 6483 Query 7536 GGGGATCGAGATCCCCGAGGGTGCGACGGCCGTGCACGGCATCACGACCGAGCACGCCCG 7595 || | ||||||||| || || || || |||||||| |||||||| | |||||| || Sbjct 6482 CGGTGTGCCGATCCCCGACGGCGCAACCGCGGTGCACGGGATCACGACGGCGCACGCGCG 6423 Query 7596 CGAGCACGGCGAGCGCGCGCACGACGTCGTCGACCAGGTCGCCGAGACGCTCGCGCTCCG 7655 | ||||| || || | || || |||| | | || | | | || ||| ||| Sbjct 6422 AGCCCACGGGCGGCCCGTCCCTGAGGTGGTCGCCGAAGTGACTGCTGCCCT-GCGGTCCC 6364 Query 7656 CGTTCGGG-ACGGTGTGCCGGTCGTCGGGCACAACGTGCCTTATGACTTGACGCTGCTCG 7714 |||| | | |||||||||||||||| |||||| | | | ||||| ||||||||| Sbjct 6363 TGTTCCGTCAGGGTGTGCCGGTCGTCGCATACAACGCGTCGTTCGACTTCTCGCTGCTCG 6304 Query 7715 ACCGCGAGTGCCGC-CGGTACG 7735 | |||| ||||| ||| ||| Sbjct 6303 CCTGCGA-AGCCGCTCGGCACG 6283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157363099704468