Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq178 125 1e-24 >seq178 Length=53349 Score = 125 bits (138), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAG-ATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| | | || || | ||||| | |||||||||||||| || || Sbjct 44907 GCCAAGCGTCATCGCA-AGATGCTCAAGGACTACATCTACGGAATCACCAAGCCCGCCAT 44849 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || ||||| || ||||||||| |||| | |||| || ||||| Sbjct 44848 CCGTCGTCTTGCGCGCCGTGGAGGTGTCAAGCGTATCTCCTCCCAGATCTACGATGAGAT 44789 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | | ||||||| || ||| || || |||||| || ||| || || Sbjct 44788 CCGTAACGTTCTCCGTAACTTCCTCGAGCTCGTCATTCACGATGCTGTCGCCTACACTGA 44729 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644 |||||| || || ||||||||| ||||||| Sbjct 44728 GCACGCCAATCGCCGCACTGTCACCGCCATGGA 44696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79065757951611