Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq716 86.0 8e-12 seq2070 84.2 3e-11 >seq716 Length=76659 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 164824 CGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCAAA 164883 ||||||||||| ||||||||||| || ||| ||||||| ||| ||||||| |||||||| Sbjct 53965 CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA 53906 Query 164884 TCCCACTCCCGC 164895 ||| ||||||| Sbjct 53905 TCCGGCTCCCGC 53894 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 164824 CGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCAAA 164883 ||||||||||| ||||||||||| || ||| ||||||| ||| ||||||| |||||||| Sbjct 54248 CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA 54189 Query 164884 TCCCACTCCCGC 164895 ||| ||||||| Sbjct 54188 TCCGGCTCCCGC 54177 >seq2070 Length=16073 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 120240 CGGGGTGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCGAA 120299 ||||| |||||||||||||||||||| | ||||||||||||| | || || |||||| | Sbjct 3198 CGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAC 3139 Query 120300 TCCTATCACCCCGA 120313 |||| || |||||| Sbjct 3138 TCCTGTCGCCCCGA 3125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627886937180800