Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq19 109 6e-19 >seq19 Length=879724 Score = 109 bits (120), Expect = 6e-19 Identities = 300/454 (66%), Gaps = 12/454 (3%) Strand=Plus/Minus Query 21183 TTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAG 21242 ||||||||||||||| || | ||| || || ||||| || || |||| || || || Sbjct 584135 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 584076 Query 21243 ATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATA 21302 |||||||||||||| ||||| | | | ||||||| || |||||||||| | Sbjct 584075 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 584016 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 |||| ||||| ||||| || ||||| || |||| | || |||||| ||||||| Sbjct 584015 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 583956 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422 || || | || | ||| | ||| ||||| || || || || || | Sbjct 583955 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 583896 Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAATAATTG-----TTTAAACATCAAACA 21477 | | || | | || | || || | || ||| |||| | | || || Sbjct 583895 T-TCCATGAAC---GACTTCCT-GGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCA 583841 Query 21478 TGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACC 21537 ||||| |||||||||| || ||||| || || || |||||| ||| |||| || Sbjct 583840 GGCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCC 583781 Query 21538 GGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTG-AAAAGAAAA 21596 ||||| | ||||| ||||| ||||| || || || || | ||||| | ||||||| Sbjct 583780 TGGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGA-ACAGAAGCTCCCGCTGAAGAAAA 583722 Query 21597 TGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 |||| || || || || || || || || ||||| Sbjct 583721 TGCCTTCCACTGCGGCGAAAGCCACCAAACGTTC 583688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531832138255480