Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq447 221 3e-53 seq1338 123 6e-24 >seq447 Length=48793 Score = 221 bits (244), Expect = 3e-53 Identities = 185/227 (81%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29791 CGCGAGATCGCGGATCTTGTCGAGGCTCGCCACAACGACGTTGTCACGACCATCGAACGT 29850 || || ||||| ||||| |||||||| || |||||||| || |||| |||||||| ||| Sbjct 4293 CGGGAAATCGCCGATCTAGTCGAGGCCCGGCACAACGATGTAATCACCACCATCGAGCGT 4352 Query 29851 CTCTTCGACAAGGGGCTTTTACGATCAAGTCGTAAAACTCGCCGGGAGTCCACCGGTGGC 29910 || || | ||| ||||||||||||||| |||||||||||| || || ||||||| ||| Sbjct 4353 CTTTTTGCCAAAGGGCTTTTACGATCAGATCGTAAAACTCGGCGTGAAGCCACCGGCGGC 4412 Query 29911 CGTCCGATCGCTGTGTATGACCTGATCGAGAGGGATACTCACCTGGTCGTTGCTGGTTAC 29970 || ||||| | ||| || ||||||| |||| | ||||| || |||||||| ||||| ||| Sbjct 4413 CGACCGATTGATGTCTACGACCTGACCGAGCGTGATACGCATCTGGTCGTGGCTGGCTAC 4472 Query 29971 AGCGATGAGCATCGTGCCCGAGTGATCGACCGCTGGCAGCAGCTTGA 30017 ||||| ||||| || || ||||| ||||||||||||||| | || || Sbjct 4473 AGCGACGAGCACCGCGCACGAGTTATCGACCGCTGGCAGGAACTGGA 4519 >seq1338 Length=18756 Score = 123 bits (136), Expect = 6e-24 Identities = 317/481 (66%), Gaps = 4/481 (1%) Strand=Plus/Plus Query 758 TTTCAGGTCGCCATCCTGAACGCCATGGGTAACGACCTGATTCGGGTCGTAAACTTCGTG 817 |||||| |||||| |||| || ||||| | |||| || || | || || | ||| Sbjct 1 TTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTG 60 Query 818 AAGTCGGCACGCATCGGCTACACGAAAATGCTGATGGCCAACATCGGCTACAAGATTCAG 877 ||||| || || |||| || | ||||||||| ||| | |||| || || Sbjct 61 AAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAG 120 Query 878 CACAAGCGCCGTAATGTGCTGATGTGGAGCCCGACTGACCCAGACGCCGAGGGGATCAGC 937 || |||| || || || || ||| ||||| || || |||||| | | Sbjct 121 CATAAGCAGCGCAACACACTTATCTGGTTGCCGACGGATGGTGATGCCGAGAACTTTATG 180 Query 938 AAGAGCCACGTTAAT--GGCCTGATTCGCGATGTTCCGGTGCTGCTGGCGCTGGCCCCAT 995 || | ||||||| | | || || |||||| ||||| ||||||||||||||| || | Sbjct 181 AAAACCCACGTTGAGCCGACC--ATCCGCGATATTCCGTCGCTGCTGGCGCTGGCTCCGT 238 Query 996 GGTATGGCCGCAAGCATAGCGACAACACGCTCGACACCAAGGTGTTTGCAAACCGGCGGA 1055 |||||||| ||||| | || ||||||||| | ||| ||| | || | || Sbjct 239 GGTATGGCAAAAAGCACCGGGATAACACGCTCACTATGAAGCGTTTTTCCAATGGTCGTG 298 Query 1056 CCCTTTGGACGCTCGGCGGCAAGGCTGCTCGCAACTACCGTGAGAGATCTGCCGACGAGG 1115 | | ||| || ||||| || || || ||||||||||| | || | || | || Sbjct 299 GCTTCTGGTGCCTGGGCGGTAAAGCGGCAAAAAACTACCGTGAAAAGTCGGTGGATGTGG 358 Query 1116 TGATCTATGACGAGCTGTCGAAGTTCGACGCCGATATTGAAGGTGAAGGTTCCCCAACGT 1175 | ||||| || || | || || | ||||||||| ||||| || || |||| Sbjct 359 CGGGTTATGATGAACTTGCTGCCTTTGATGAGGATATTGAACAGGAAGGCTCTCCGACGT 418 Query 1176 TCCTTGGCGACCAACGTCTGCGCGGTGCTGTTTACCCGAAGTCCATCCGTGGATCGACGC 1235 ||||||||||| ||||| | || | || | || |||||||||||||| || |||| Sbjct 419 TCCTTGGCGACAAACGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACGC 478 Query 1236 C 1236 | Sbjct 479 C 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125299832205414