Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1971 82.4 6e-11 >seq1971 Length=9940 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||||| | || | ||||||| | || Sbjct 5029 TGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGC 4970 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTG 16851 ||||| || |||| || ||||||||||| || | ||||| |||| | | | ||| Sbjct 4969 TTGCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTG 4910 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | |||||| | ||| || | |||||||| || || || Sbjct 4909 GT-CTTGACGTTCTCGATGGTGTCGGAGCCCTCAACCTCGAGAGTGATGGTCTTGCCAGT 4851 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| ||||||||||| Sbjct 4850 CAAGGTCTTGACGAAAATCTGCAT 4827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405037015497730