Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_008206.2 Length=78296 Score E Sequences producing significant alignments: (Bits) Value seq1940 98.7 5e-16 >seq1940 Length=14353 Score = 98.7 bits (108), Expect = 5e-16 Identities = 144/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 49135 TGTTCCTCCGCTGCAAC-GTGTGGCGTGAGTACGCTGAGAACGTCGCTGAGTCGCTGACA 49193 |||||||||| |||| | || ||||| |||| ||| ||| |||| || | ||| |||| Sbjct 12780 TGTTCCTCCG-TGCATCCGTCTGGCGCGAGTTCGCCGAGCACGTGGCGGGTTCGTTGACG 12722 Query 49194 CGCGGCACCACCGTGATCGTCACCGGCAAGCTCT-CG-CAGCGGAACTTCGAGGACCGCG 49251 |||| ||| |||| | | || | ||| || ||||| || | ||||||||| Sbjct 12721 AAGGGCATGCGCGTCATCG-CGCAGGGCCG-TCTGCGTCAGCGCTCCTACCAGGACCGCG 12664 Query 49252 AGGGGAACAAGCGCACCGTCGTGGAGCTGGAGGTCGATGAGATCGGACCCGCTCTGCGTT 49311 |||| ||| ||||||||| | |||||||||||||| |||||||| ||| | || || | Sbjct 12663 AGGGCAACCAGCGCACCGCGATCGAGCTGGAGGTCGACGAGATCGGCCCCTCGCTCCGGT 12604 Query 49312 TCGCCACGGCGAAGGT 49327 ||| || ||| |||| Sbjct 12603 ACGCGACCGCGCAGGT 12588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 250390881758479