Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq19 176 5e-39 >seq19 Length=879724 Score = 176 bits (194), Expect = 5e-39 Identities = 396/590 (67%), Gaps = 10/590 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||| || ||| | || || |||| || ||||||||||| || || |||| Sbjct 583843 GCAGGCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAG 583784 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||||| | ||| |||| ||| || | ||| || || ||| || || || || || Sbjct 583783 CCCTGGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAAGCTCCCGCTGAAGAA 583724 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || |||||||| || || || ||||| | |||||||||||||||| || | | Sbjct 583723 AATGCCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA----- 583669 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||| || ||||| || ||||||||||| | |||||| | || || | || | Sbjct 583668 -ATCCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATG 583610 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || || ||| || || | |||| || || |||||||| | ||| | ||| | Sbjct 583609 GAACAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGT 583550 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 |||||| |||| || ||||| || ||||| || || ||||| | ||||| | | Sbjct 583549 TTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAG 583490 Query 93451 CTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 ||| ||||| | | || | || || | || |||||||| || || || || ||| | Sbjct 583489 CTGTACTTCGCTCATGAAGT-TCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAG 583431 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC-ATCTTTAAGCTTATCCCAA 93568 |||||||||| | |||||| || ||||| ||| | | |||||| || ||||| Sbjct 583430 CAAAAAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAG-TTGTCCCAG 583372 Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628 | | || | ||||| || | |||||| | ||||| || |||||| || Sbjct 583371 TGCTTCTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTC 583312 Query 93629 TTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 || ||||| ||||| || || | |||| ||| || || | ||||| || Sbjct 583311 TTATACATTTCCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAAGCG 583262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556788916231480