Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq98 113 1e-20 seq152 93.3 9e-15 >seq98 Length=166217 Score = 113 bits (124), Expect = 1e-20 Identities = 174/246 (71%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 13892 AGCGATCCCCGGTCCAGAACCGGTACGCCTCGTGCACCTTGCTCGACGGGGTCGAGAAGT 13951 |||| || || |||||||| ||| || |||||| || || | || || || ||||| Sbjct 136178 AGCGCTCGCCTGTCCAGAAATCGTAGGCTTCGTGCGCCATGGTGGAAGGCGTGCTGAAGT 136119 Query 13952 AGGTCTTGCGCCAGTGGCTCTGGGTCGCCATGGCACTGGCCACATCAGACAGCTTCTCGA 14011 ||||||||||||| | | || |||||||| | ||||| || | ||||| | || Sbjct 136118 AGGTCTTGCGCCATTTCTTGTGCATCGCCATGCCGCTGGCGACCTTGTTCAGCTGGTTGA 136059 Query 14012 AGTTGGGGATCCAGAAGTATTCGTCGATGTAGACGTTGCCGGAGCGGGACTGGGCACTGT 14071 || | | |||||||| ||||||||| ||||| || ||| | | ||| || || Sbjct 136058 AGCCGTAGGTCCAGAAGAATTCGTCGAAGTAGAAATTCCCGTGGTAGCCCTGCGCGGTGC 135999 Query 14072 TGGAGTTGGTGGAGCAG-AAGTGCAGCTCGGCCCCGTTCGACAGCACGATGGGGTTGCCG 14130 | |||||| | ||| ||| |||||| || ||||| | ||| |||||||| | |||| Sbjct 135998 GTGCGTTGGT-GCCCAGAAAGAACAGCTCAGCGCCGTTGGCCAGGACGATGGGATCGCCG 135940 Query 14131 GTCAGG 14136 || ||| Sbjct 135939 GTGAGG 135934 >seq152 Length=191884 Score = 93.3 bits (102), Expect = 9e-15 Identities = 132/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 22994 GACTTTGGCCCCGTCTCACAGGACACCTGGGCTATCCAGCTTATCCGCGAGCGCAAGGCG 23053 ||||| ||||| | || |||||| ||||| |||||||| ||||||||||| ||| Sbjct 60287 GACTTCGGCCCGCTGTCGCAGGACGTATGGGCAATCCAGCTGATCCGCGAGCGGCGCGCG 60346 Query 23054 CTGGACGACGTGATCAAGGGGCGCATCCCCCAGGCGATCA--GCAAGTGCGCC-AACATG 23110 ||| | ||||| ||| ||| | ||| || || ||| | ||||| Sbjct 60347 CTGCCCC---TGATCCAGGCCGGCAAGATCGAGGATGCCATTGCTCGTGTTCGGAACATC 60403 Query 23111 TGGGCCAGCCTGCCCGGCGCCGGCTACGGCCAGCGCGAGCACAAGCTGGCGGATCTGCTG 23170 ||||| |||||||| ||||| ||||||||||||| |||||||||||| | || ||| || Sbjct 60404 TGGGCGAGCCTGCCGGGCGCGGGCTACGGCCAGCCCGAGCACAAGCTTTCCGACCTGATG 60463 Query 23171 GCC 23173 ||| Sbjct 60464 GCC 60466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108617078314578