Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_009811.2 Length=137619 Score E Sequences producing significant alignments: (Bits) Value seq153 125 6e-24 >seq153 Length=135117 Score = 125 bits (138), Expect = 6e-24 Identities = 335/504 (66%), Gaps = 6/504 (1%) Strand=Plus/Plus Query 90569 CAATCATCTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTATAACCTT 90628 || || || ||| | || || || || ||||| ||| || || | ||||| ||||| Sbjct 57119 CAGTCGTCGATCCTGGAAGGCATCAACTTCTATTCCGGCTTCGCGTTTTTCTACAACCTG 57178 Query 90629 GTTCGTCAAAACAAGATGACGGGAACAGGTAAAATCATTAGCTTCATTAATCGTGATGAG 90688 || || || ||| ||||| || || || || ||||| |||||||| || || || || Sbjct 57179 GTCCGCCAGAACCGCATGACCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAA 57238 Query 90689 TTAGCCCATTCGAAGTTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAA 90748 | ||||| | ||||| || || || || | || || | || || |||| | Sbjct 57239 CTGGCCCACACCAAGTTCATCAGCGAACTGATCCGCGCCATCATCGGCGAGAACCAGCAG 57298 Query 90749 CTACAAACAGATGAACTAAATGACTACGTGTATGCTTCTTTTAGACATGCCGTAGAGCTA 90808 || || || | || | | |||||| | | | | || |||||| | | ||| Sbjct 57299 CTTCAGGGCGACCAGCTCACCGCTTACGTGCACGATGCATTCGAGCATGCCATCGCGCTG 57358 Query 90809 GAACAAGCG-TGGTCTAGTGAGGTACTACAGGGCATTGAAGGAATTGATGTGGAAGAGAT 90867 ||| | ||| ||| | | ||||| || | ||||| || || || || ||||| ||||| Sbjct 57359 GAA-ACGCGCTGGACCGGCGAGGTGCTGGACGGCATCGACGGCATCGACGTGGACGAGAT 57417 Query 90868 GTTAGACTATGTAAAATATCGTGCTAATAAAATGTTAGGGATGCTAGGTCTTCAACCAA- 90926 | | ||| || || || || || || || ||| || ||||| || | || | | Sbjct 57418 GATCCGCTACGTGAAGTACCGCGCCAACAAGATGGCCGGCATGCTCGG-CATCGAGAAGC 57476 Query 90927 TGTATCAAGGTCACACA-GAAAATTCTATGACATGGATTAAAGCTTACGCCGATAACTTT 90985 |||| || | ||| | | || ||| | ||||| || || || ||||| || || Sbjct 57477 TGTA-CAGCGACACCAACGTCAACGTGATGCCGTGGATCAAGGCCTATGCCGACAATTTC 57535 Query 90986 ACAGAAACAAAAACCGACTTTTTCGAAATGCGTAACTCTAGTTACAAGAAAACAAACTTA 91045 || || || || |||||||| ||||| ||||| ||| | ||||||||||| || || | Sbjct 57536 ACCGAGACCAAGACCGACTTCTTCGAGATGCGCAACGCCAGTTACAAGAAGACCAATTCG 57595 Query 91046 GACAATGGGTTCGATGACTTATGA 91069 ||||| || ||||| ||| | ||| Sbjct 57596 GACAACGGCTTCGACGACCTGTGA 57619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440195968866680