Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_009821.1 Length=164270 Score E Sequences producing significant alignments: (Bits) Value seq3870 98.7 1e-15 >seq3870 Length=345 Score = 98.7 bits (108), Expect = 1e-15 Identities = 181/263 (69%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 35216 CGCTTACTAGAACATTCCAATGCAAGTTGCTTAATGTCGTAGTTCGGATCTTCCGGGTTA 35275 ||||| || | || |||| || || || || ||||||||||||||||| | ||| Sbjct 286 CGCTTGCTTGCGCACTCCAGCGCCAGCTGTTTGATGTCGTAGTTCGGATCGCCTTTTTTA 227 Query 35276 AGGTTTAATCCTTCTTCTAAGAAC-ATCACCAGCTTAGGAAACACCGGAGTTATACCATC 35334 |||| | || || | || | | |||||| || || ||||||| |||| ||| | Sbjct 226 TGGTTCAGACCATC-GCGAATCGCAAACACCAGTTTCGGGAACACCGCAGTTTTACGGTT 168 Query 35335 TTTACCTAAACCTTTAGTTCGAACTTTCAGGATCGCTTTCTGAATCAGTTTTTCTTCCCA 35394 |||||| | ||| | || |||||||| || ||||||||| |||||| Sbjct 167 TTTACCGAGGCCTGCGATACGGTTACGCAGGATCGATTCCTGAATCAGGCGCGATTCCCA 108 Query 35395 GCTAGTACCCATACCAAATGTTAAAGTCACAAAAGGCGTTTGACCGTTGGTGGAGAACAA 35454 ||| || |||| |||||| || || ||||| ||||| |||||||||| || | || Sbjct 107 GCTGGTGCCCAGACCAAAACCAAAGGTTACAAACGGCGTCTGACCGTTGGCGGTGTGCAG 48 Query 35455 AGTGTTGATTTCATATTCCAACG 35477 ||||| | ||| || |||| || Sbjct 47 GGTGTTTACTTCGTACTCCAGCG 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525468159871600