Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq1661 98.7 4e-16 >seq1661 Length=12788 Score = 98.7 bits (108), Expect = 4e-16 Identities = 143/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 4998 AGGCCGCGCTGCTCGTGGTGGATGAGTATTCCATGATTGACGAACAGATGGGGGAGGACT 5057 ||||| |||| |||| || || |||| || ||| | ||||||||| | || || Sbjct 8415 AGGCCAAGCTGATCGTCGTCGACGAGTGCTCGATGGTGGACGAACAGCTCGGCCGCGATC 8356 Query 5058 TGCTCAGCTTCGGTTGCCCGATCCTCGCCCTGGGCGATCCGGGGCAGCTCCCGCCCGTGG 5117 | | |||||||| ||| || || | |||||||| || || ||||| |||||| | Sbjct 8355 TCATGAGCTTCGGCACCCCCATTCTGGTGCTGGGCGACCCTGGCCAGCTGCCGCCCATAT 8296 Query 5118 GCGGCACCCCCTTCTTCAA-GAACA--AGCCCGACATCCTGCTCACGGAGATTCACCGCC 5174 |||| | |||||||| ||||| |||| || ||||||||| || || ||||| | Sbjct 8295 CCGGCGGCGGCTTCTTCACCGAACACGAGCCGGATTTCCTGCTCAGCGAAATCCACCGGC 8236 Query 5175 AGGCCCAGGACAACCCGATC 5194 |||| | |||||||||||| Sbjct 8235 AGGCGCGCGACAACCCGATC 8216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187576994025750