Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq44 210 3e-49 seq1288 132 6e-26 seq105 122 1e-22 seq712 109 7e-19 seq1327 91.5 2e-13 seq1314 89.7 6e-13 >seq44 Length=77107 Score = 210 bits (232), Expect = 3e-49 Identities = 579/876 (66%), Gaps = 20/876 (2%) Strand=Plus/Minus Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 ||| |||| || | |||||| || || || || ||||| | | ||||| | ||| Sbjct 10072 ACAAACTTTGGCAAGGCGATAGAGGCGAGGTTGCACACGGCGACTTCATCGGGAGAGGTG 10013 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTA---ATGGTGCCCAAGTTCTTTTGA 114571 |||| | ||| || || || || ||| || | ||||| || | ||||| || Sbjct 10012 TACTGAACAATCTCGGTGCA-AAGGTTG--CTGCAAGAGATGGTTCCGAGGTTCTGCTGG 9956 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||||| |||| || || |||||||| || ||||| || || || ||||| | || Sbjct 9955 TTGGACTTGCTGTTGCAAGCGTCCTTGTAGAGGATGTAGGGGGTACCGGTCTCGATCTGT 9896 Query 114632 GACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTG-GCTCGCCCCTC 114690 |||| || ||||| ||||| ||| || || ||| || | | | || Sbjct 9895 GACTCGATGATAGCGAACCAGAGATCCTGAGCCTTTACGGTG-CGACGAGAGAGGCCAGG 9837 Query 114691 ---CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 | |||| ||||| |||||||| | ||||| || ||| | ||| | ||| || Sbjct 9836 TGTCGCCTCATACTTGGTGTAGAGCTCGCGGAACTCATCTCCCCAGCACTCGGCGAGGCC 9777 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 ||||||| || || ||||||||| ||| | | ||| ||||||| |||||| Sbjct 9776 AGGTGCCTCATTGGGACAGAAGAGACTCCAGTCAGAGTTGGTCTCGACACGCTCCATGAA 9717 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCC 114865 || || | || |||||| || ||||||| || || || || ||| || | || Sbjct 9716 CAGATCAGAGACCCAGAGCGCGTAGAAGAGGTCGCGG--GCACGCATCTCCTCCTTGCCG 9659 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || || | || | || || | || || |||||||| || || ||||| || Sbjct 9658 TGGTTCTTGCGAAGATCAAGGAACTCAAAGACGTCGGCGTGCCATGGCTCGAGGTAGACG 9599 Query 114926 GCGATTGACCCCTTACGA---CGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 || | | ||||| || | ||| |||||| || || | || ||| |||| || Sbjct 9598 GCAAAGGCACCCTTGCGCTTTCCGCCACCCTGGTCGACGTAGCGGGCAGTGTCATTGAAG 9539 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTA 115042 |||||||||||||| | || || | || ||| || || || || || || Sbjct 9538 ACGCGAAGCATTGGTACGAGTCCGTTCGAGGTGCCGTTGGTACCGCGGATGTAGGAGCGG 9479 Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102 |||| | || | |||||| ||||| | ||| || || |||||||||| | ||| Sbjct 9478 CTGGCACGGATCTTGTGGATGGCGATACCGAGACCACCGGCAGACTTTGAGATGAGGGCG 9419 Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAA 115161 |||| | | || | ||||||| |||||||| ||| |||| || || || ||||| Sbjct 9418 CACTGCTTAAGTGTCTCGTAGATACCGTCGATGCTGTCCTCCTTCATCTG-GACGAGGAA 9360 Query 115162 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 115221 ||| ||||| || || | || ||||| | ||||||||||||||| || ||||| | Sbjct 9359 GCAAGAGGACATCTGGGGTGTGGGGGTACCCGAGTTGAAGAGGGTTGGCGTGGCGTGCGT 9300 Query 115222 GAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 115281 || | || | || | || | |||||| || | | ||||| |||||| || ||||| Sbjct 9299 AAAGAGACGCTTCGAGAGCTGGTGGTAGGTTTCGACGGCGGCGTCAATGTCATCGCCGTG 9240 Query 115282 AATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 ||||||| ||||| ||||| | ||| | |||||| Sbjct 9239 GATACCGAGAGAGACACGCATGAGCATCTGTTGGGG 9204 Score = 134 bits (148), Expect = 2e-26 Identities = 305/452 (67%), Gaps = 10/452 (2%) Strand=Plus/Minus Query 113596 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGA 113655 || |||||||||||| || ||||| || |||| |||||| || || | ||||| || | Sbjct 10940 TCTGAGGTAGTACATTCCAGTCTTCAGACCCTTCTTCCAAGCGTAGAAGTGCATTGAAGT 10881 Query 113656 CAACTTGG-AGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGA 113714 |||||||| | ||| |||| | ||||| | ||| | ||| || ||||| | Sbjct 10880 CAACTTGGCAAAGT-TTGGCTCGGCGATGAACACGTTGAACGACTGGCTCTGGTCGATAA 10822 Query 113715 AGCGTCCACGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTT 113773 || ||||| || || ||||| || || | | | | | ||| ||||| ||||| Sbjct 10821 AGGCACCACGGTCGGCAGCCATGTCGATGAGGGTACGTTGACG-GATCTCCCAGACAGTC 10763 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 ||||||| | ||| | || || || || || ||| || |||||||| |||| Sbjct 10762 TTGTAGAGCTCCTTTAACTCGTCAGGAATGCCCTGGATGTTCTGGATGGA---ACCCTTG 10706 Query 113834 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890 | | |||| | | |||||| || || |||||| ||| || |||| |||| Sbjct 10705 TGAGCGATGATCTGGTTCTTCATCTCTGGTGTCCAGAGGTCAAGCTCCATGAGGTCCTTG 10646 Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950 | || ||||| ||||| ||| ||||| || |||||| ||| | ||||| ||| Sbjct 10645 AGCAGCTGCTTGTTGACGACAGTGAACTCTCCGGCGAGGACGCGACGACTGTAGATGTTG 10586 Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010 | ||||| || || || ||| ||||| || | ||| || | ||| ||||| || ||| Sbjct 10585 CTGGTGTACGGTTCGAACGCCTCGTTGTTTCCGAGGATCTGAGAGGTCGAGGCGGTAGGC 10526 Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACC 114042 |||||||| | | | ||||| |||||||| Sbjct 10525 ATGGGTGCAACCATCAAACTGTTGCGGAGACC 10494 >seq1288 Length=22276 Score = 132 bits (146), Expect = 6e-26 Identities = 154/207 (74%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||| |||||||| ||| ||| || || ||||||||| || || Sbjct 671 GGCAAAGTCGCAGTGGAGGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGAAGGTGAGGCC 612 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||| || |||||||| | |||||| |||| || || || |||||||||||||| Sbjct 611 GTGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGAT 552 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || || ||||| | ||| ||||| |||||| |||||| ||| || | Sbjct 551 GCCCTCGACGGCGGCAAACGCGACGAGGCGCTCGGCAAAGCTGCGCGAGTTT---TCGAT 495 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTT 126252 ||| |||||||||| ||||| || Sbjct 494 CCAGCGGATCGCCCACTCGGCCTTCTT 468 >seq105 Length=265611 Score = 122 bits (134), Expect = 1e-22 Identities = 282/415 (68%), Gaps = 10/415 (2%) Strand=Plus/Minus Query 10742 ATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCT 10801 |||| |||||| |||||||| || ||| ||| || || || || |||||||| Sbjct 116149 ATCTGCTCGCGGCCGCGCACGTCGGCCAGGCCCACAACGACCTGGCGGTCGAAGCGACCC 116090 Query 10802 GGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATG 10861 || || || || || || || | || ||||| || || |||||||| | | | Sbjct 116089 GGACGCAGCAGCGCCGGATCCAGCACGTCGGGACGGTTGGTGGCGGCGATGACGATCACG 116030 Query 10862 CCCGTCTCGTTA-TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCG 10920 ||| || | | || ||||| |||||||| || || || || | ||| || ||||| Sbjct 116029 CCC-TCGCCTCCCTCGAAGCCGTCCATCTCGACCAGCAGCTGGTTCAGGGTCTGCTCGCG 115971 Query 10921 TTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCA 10978 || |||| || | ||| || |||| || || ||||||||||| ||||| Sbjct 115970 CTCGTCATGACCG--CCGCCCAGGCCGGCACCACGGTGGCGGCCGACGGCGTCGATTTCG 115913 Query 10979 TCGATGAAAACGATACACGGTTGAT-TTTCACGGGCAACTTCAAAGATATCTCGGACTCT 11037 |||||||| | ||| ||||| | ||| || | | || || || || ||||| | Sbjct 115912 TCGATGAAGATGATGCACGGCGCCTGCTTCTTGGCCTGC-TCGAACATGTCGCGGACGCG 115854 Query 11038 CTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGG 11096 |||| ||||| || || ||||||||||| |||| | ||| | || | || ||| | Sbjct 115853 GCTGGCGCCGACGCCGACGAACATTTCCACGAAATCCGAACCGG-AGATCGAGAAGAACG 115795 Query 11097 GGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 |||| |||| || || |||||||| ||||| || |||||||| || || || || Sbjct 115794 GGACCTTGGCCTCGCCGGCGATGGCGCGGGCAAGCAGGGTCTTGCCGGTACCGGG 115740 >seq712 Length=105793 Score = 109 bits (120), Expect = 7e-19 Identities = 258/380 (68%), Gaps = 16/380 (4%) Strand=Plus/Minus Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839 || || ||| ||||| || || || || || | ||| ||| || | || ||||| Sbjct 53085 GACCTGACGGTCAAAACGGCCCGGACGCAGCAACGCGGGGTCGAGTACGTCTGGACGGTT 53026 Query 10840 CGTCGCCGCGATGACAACGATGCCCGTC--TCGTTATCAAAGCCATCCATCTCAGTCAAG 10897 || || ||||| || | |||||| ||| || || |||||||| ||||||||| || Sbjct 53025 GGTTGCAGCGATCACGATGATGCC-GTCGTTCATT-TCAAAGCCGTCCATCTCAACCAGC 52968 Query 10898 AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTT 10955 | || || | || || || || ||||||| || | ||| || || | || | Sbjct 52967 AACTGGTTAAGCGTCTGCTCACGCTCATCATGACCG--CCGCCCATGCCGGCGCCACGAT 52910 Query 10956 GCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT---TGATTTTCACGGG 11012 | ||| |||||||| |||||||||||||| | ||| ||||| || || | || Sbjct 52909 GGCGACCAACGGCGTCGATTTCATCGATGAAGATGATGCACGGAGCGTGCTTCTT---GG 52853 Query 11013 CAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAAT 11072 | ||| || ||||| || || | ||||||| ||||| ||||||||||| || || | Sbjct 52852 CCTGTTCGAACATATCGCGAACACGGCTGGCACCTACACCGACAAACATTTCGACGAAGT 52793 Query 11073 TGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 11131 || ||||| || | || ||| || || |||| ||| || || ||||| ||| | Sbjct 52792 CGGAACCGGAA-ATGGTGAAGAAAGGTACTTTGGCTTCGCCGGCAATGGCCTTGGCCAAC 52734 Query 11132 AGGGTCTTCCCCGTCCCAGG 11151 ||||| || || || || || Sbjct 52733 AGGGTTTTACCGGTACCTGG 52714 >seq1327 Length=12810 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 11020 AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGC 11079 ||||| |||| ||||| ||||||||||||| | | || |||| |||| ||| | Sbjct 227 AAAGAGGTCTCTAACTCTTCTGGCACCGACACCTATATACTTTTCGTCAAAGCTGGATCC 286 Query 11080 GGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 11139 || | || ||||||||||| || ||| || |||||||| ||||||||||||||||| Sbjct 287 GGTGGTGTAGAGGAAGGGGACGTCGGCTTCTCCGGCGATGGCGCGGGCGAGGAGGGTCTT 346 Query 11140 CCCCGTCCCAGGTTTCCCTGCGAGAAGG 11167 || || || || | || | ||| ||| Sbjct 347 GCCGGTGCCTGGCTCGCCCGAGAGCAGG 374 >seq1314 Length=16474 Score = 89.7 bits (98), Expect = 6e-13 Identities = 195/290 (67%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 171873 TGAGTTTTGTGAAGATGTACCTCGTTTGAGACGCA---TCTTTGCCACCCATGAGACGCG 171929 ||||||| || |||||||| | | || ||| |||| |||||| |||||| | Sbjct 8670 TGAGTTTGGTAAAGATGTAACGAG---GACTGGCAGAGTCTTCGCCACCTTGGAGACGGG 8726 Query 171930 TCCCAAATTGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGG 171989 | || |||||||| | | | |||| ||| ||||| || | |||| | || Sbjct 8727 TACCGAATTGACCGCCTTGGGAGATGAGAGGGATGTTGTTGCTTCCGACAAAGTCTTGGG 8786 Query 171990 CCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCG 172049 ||| ||||| || || || ||| || || ||||| |||||||| | | || | Sbjct 8787 CCATTTTGACGATGGTGGACGAGAGCGATTGCTCGCCGTGGTGGTAGGCGGTGTGCTCGG 8846 Query 172050 CGACATACGCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACG 172109 |||| || | || | ||| || ||||| ||||| || |||||| | |||||| | Sbjct 8847 CGACGTAGCCGGCGAGCTGGGCGACCTTTATCTCGCTCTGGAGGTTGCGCTTGAAGCAGG 8906 Query 172110 CATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCG 172159 | ||||||| ||| | ||| ||||||||||||| ||||| ||||| Sbjct 8907 CGTACATGATCTTGCGCTGGCCCGGCTTGAGGCCGT---CCATGAGCGCG 8953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597276489117160