Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq716 259 1e-64 seq152 118 3e-22 >seq716 Length=76659 Score = 259 bits (286), Expect = 1e-64 Identities = 365/508 (72%), Gaps = 10/508 (2%) Strand=Plus/Plus Query 15026 AACGTGTTCGTTGCGCCCTCGGTGCATGCGATCGGCTGCCTGGCGGCGGTGCAGCCGTGG 15085 ||||||||| | ||||| ||| | || |||| | ||||| ||| ||| ||| Sbjct 17063 AACGTGTTCCTGGCGCCGTCGTCCCTGGCCATCGCCGCGCTGGCCAAGGTCAAGCAATGG 17122 Query 15086 CAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCACGTGGATTACAAC 15145 ||||||| ||||| |||| || | | | ||| | ||| || || |||||| Sbjct 17123 GAAAGCCCGGGCAATCAGGTGACCTTCGCCGAAGACGTGTCCCGCGTGGTTGAGTACAAC 17182 Query 15146 ATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATCAGCTACTACGCG 15205 || ||||||| || || || |||||||||||||||||||||||| | ||||||||||| Sbjct 17183 ATCCTCGACACCTCCACCGAAGGCGACCTGCTCAACCGCTACGGCGTGAGCTACTACGCC 17242 Query 15206 CGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACCGGCGAGTTTATC 15265 ||||||| ||| ||||| ||||||||| | || |||||| | | |||||| |||| ||| Sbjct 17243 CGCACCATCCTCGGCGGTTTCTCGCTGCTGGGTAACCGCTCCATCACCGGCAAGTTCATC 17302 Query 15266 TCGCACGTAGGCCTTGAAGACGCCATCGGTCGCAAGATCGTC--GGCGCGTCGCAGAAGG 15323 |||| ||||| ||||| || ||| | |||||| | ||| ||| || | ||||| | Sbjct 17303 AGCTACGTGGGCCTGGAAGATGCGATCAGCCGCAAGCTGGTCAAGGC-CGGC-CAGAAAG 17360 Query 15324 CCATGGCGCAGAACTTGACCAAGAGCTTCATGGAGCAGGAGGT---GCGCAAGGTTGATG 15380 ||||||| ||||| |||||||| |||||||| |||||||| ||||| | | | Sbjct 17361 CCATGGCCAAGAACCTGACCAAGTCGTTCATGGACCAGGAGGTCAAGCGCA---TCAACG 17417 Query 15381 CGTTCGTTCAGGATCAGGTTGCTGCTGAGATCATCCCTGGTGGTCGTGTCTATCTGCATC 15440 | | || | ||| || | |||| ||| || || || | || || ||||| | Sbjct 17418 ACTGGCTGCAAACCCTGGTGGCCGACGAGACCATTCCCGGCGGCAGCGTGTACCTGCACC 17477 Query 15441 CTGACCTCAACACGGTCGAGCGCTATAAAAACGGTAGCTGGTACATCGTCATCGAGTACG 15500 | || | |||| |||||| || || ||||| | ||||| |||||||||||| |||| Sbjct 17478 CGGAATTGAACAGTGTCGAGAAGTACAAGAACGGCACCTGGTTCATCGTCATCGACTACG 17537 Query 15501 GCCGCTATTCCCCCAATGAGCACATGAT 15528 ||||||| | || || || |||||||| Sbjct 17538 GCCGCTACGCGCCGAACGAACACATGAT 17565 >seq152 Length=191884 Score = 118 bits (130), Expect = 3e-22 Identities = 324/482 (67%), Gaps = 17/482 (4%) Strand=Plus/Plus Query 21357 TGCTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTTCTTCATGAAGCAACCCAGCAAA 21416 ||||| || || | || ||||||||||||||| || | ||| | || | || || | Sbjct 59270 TGCTATGTCGAAGCGTTTGCGGGCGGCGCGGCGATGCTGTTCGCGC-GCCAGCCGGCTAG 59328 Query 21417 G-TGGAGGTGATCAACGACACCAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCA 21475 | | || ||| | |||||||| | |||| || || | ||| |||| || | | Sbjct 59329 GGTTGAAGTGCTGAACGACACACATGGCGAGCTCGTACGGCTCTACAGGGTCGTTGCGAA 59388 Query 21476 CCACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGTCTCGC-GTGAGATGTTCG 21534 ||||||||| |||||||| || || ||| |||| || || || || | || |||| | Sbjct 59389 CCACCTGGACGAGTTCGTACGGCATTTCCGGTGGTCGTTGA-CTAGCCGGGAAATGTACC 59447 Query 21535 CGTGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAGCGGGCCGCGCGGTTCT 21594 |||| || | || || || ||||| || || || ||||| || |||||||||| Sbjct 59448 GCTGGGCCCAGTTACAGAACGTGGAGACGCTCACAGACATTCAGCGCGCTGCGCGGTTCT 59507 Query 21595 ACTACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCA---ACTCGAACTTTGGCATCTCGA 21651 | ||||| ||| ||| |||||||| ||||||| | || ||||| | | Sbjct 59508 ATTACCTCCAGAAGCTTTCCTTTGGCGGTAAGGTCACTGGCCAGACGCTTGGCGTGGGGC 59567 Query 21652 CCACGTCTGGCCCTGGGC-TTAACCTGCTGCGGATCGAGGAGAACCTCAGCCAGGCGCAC 21710 | || | ||| | || | |||||||||||| ||||| | |||||||| | |||||| Sbjct 59568 CGAC-TGCGGCAAAGCGCATCAACCTGCTGCGGCTCGAGCAAGACCTCAGCGATGCGCAC 59626 Query 21711 TTGCGGCTCTCGCGCGTGTTCGTTGAGAACATGGACTGG--AAAGCG-GTCATGAAGCGC 21767 |||| || |||| | || |||||| || | ||| ||| | |||| |||| Sbjct 59627 CTGCGTCTGCATGGCGTCGTGGTGGAGAACCTGCAATGGCAGAAGTGCGTCAAGAAG--- 59683 Query 21768 TACGAC-CGGCCGCACACGTTGCACTATCTCGACCCGCCGTATTGGGCGACCGCTGGCTA 21826 |||||| | | || ||| | | ||| ||||| || || |||||||| | || || Sbjct 59684 TACGACACCGATTCA-ACGCTCTTCCTTCTTGACCCCCCTTACTGGGCGACTGAGGGATA 59742 Query 21827 TG 21828 || Sbjct 59743 TG 59744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125447014153818