Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_011216.1 Length=37635 Score E Sequences producing significant alignments: (Bits) Value seq757 91.5 4e-14 seq155 86.0 2e-12 >seq757 Length=83746 Score = 91.5 bits (100), Expect = 4e-14 Identities = 220/330 (67%), Gaps = 10/330 (3%) Strand=Plus/Plus Query 14670 GGAAAACATGTCGTTCGACGAGCGCCTGCAGGCGGCGAAGACCCTCATCGACGAGTGCAT 14729 ||||| ||| | |||||||| ||||| ||||| ||| | | | || ||||| ||| | Sbjct 54755 GGAAAGCATCGCTTTCGACGAACGCCTCCAGGCTGCGCGGGCATTGATTGACGAATGCCT 54814 Query 14730 CAACGAATGGGCG--CGCGGCAGCGATCCGAAGATCCAGGT---GCTGGTTCAGCAGGCG 14784 || ||| | || |||| || |||||| ||| |||||| | | || Sbjct 54815 GCGGGACTGGACCACCGGGGCA-CGCCCCGAAGT----GGTCACGCTGGTAAATGATGCC 54869 Query 14785 TTCGAGACGGACAAGGAAGGCAAGATCAACGTCGGCCGCGTACTTGCGCTGCGCCGCTTG 14844 ||| ||| ||| | ||||| | ||| | | |||||| || ||| ||||||| || Sbjct 54870 TTCCGGACTGACCAAAAAGGCGACATCCGCACAGCCCGCGTCCTGGCGTTGCGCCGTATG 54929 Query 14845 GAGATCACGGACGACAAGTGGCAACGCGCCATGCAGGCGATCGGCGAGTCGGTGCAGGTC 14904 || || || || || ||||| ||||||||||| || |||||||| | ||||| Sbjct 54930 GAAATTACCGATGAACGCTGGCAGCGCGCCATGCAAGCCATCGGCGACGCCTGCCAGGTG 54989 Query 14905 GTCGGCACGAAGACGTATATGCGCTTCTACGAGCGCGTCGAGGGCAGCGAACAATACACG 14964 || ||| | ||| | || || ||| | || |||| || | | | ||| || ||| | Sbjct 54990 GTTGGCTCCAAGTCCTACATCCGCGTGTATCAGCGTGTTGGTGATACCGACCAGTACGAG 55049 Query 14965 CCGATCAGCCTCGACTTCGCGTCGCTGTGA 14994 || |||||||| || | ||| | ||||| Sbjct 55050 CCCATCAGCCTTGATATTGCGGGGGTGTGA 55079 Score = 86.0 bits (94), Expect = 2e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 6824 GCTGTCGACGGCATGAACTGCGCCAAGCCTTCCGCACCTACCGGGCTCTTTGCGTTGGCC 6883 || ||||| ||||| | ||| ||||||||| |||||| ||||| || |||| | | Sbjct 59664 GCGGTCGAGGGCATCACCTGGCCCAAGCCTTGCGCACCGACCGGCGATTTCGCGTCGAAC 59605 Query 6884 CGCCAGCGGCTTTCCTGATGGATCTGTCCGGCGAACGTTGCGACCGGCGCTTCGAGCCCC 6943 ||||||||||||||| ||||||||| ||||||| || | | ||| || || | ||| Sbjct 59604 TTCCAGCGGCTTTCCTGGTGGATCTGTGCGGCGAAGGTGGACAACGGAGCATCCAAGCCC 59545 Query 6944 CA 6945 || Sbjct 59544 CA 59543 >seq155 Length=27654 Score = 86.0 bits (94), Expect = 2e-12 Identities = 189/278 (68%), Gaps = 14/278 (5%) Strand=Plus/Minus Query 15460 ATGAACAAGTCGCAACTCATCGACGCCGTGGCGAAGAACGCCGAGCTGACGAAGGCCCAG 15519 ||||||||| | || | ||||||||||| || || |||||| ||||| |||||| || Sbjct 1155 ATGAACAAGACCGAATTGATCGACGCCGTTGCCGAGGCCGCCGACCTGACCAAGGCCGAG 1096 Query 15520 GCGGCTCAATCCGTCGAAGCCGTGCTGAACGCGATCCAGCTC----GGCCTGCAGGAAGA 15575 | | ||||||| |||| | | ||| |||| | | | |||| ||| | Sbjct 1095 TCCAACCGCGCCGTCGATGCCG---TCATCGC-TTCCATCACCAAGGCCCTGAAGGGCGG 1040 Query 15576 CGGCGACGTGGCGCTGTCGGGCTTCGGCACCTTTGCCGTGGCAGCGCGCAAAGCACGCAC 15635 | || ||| ||||| ||||||||| || || || ||||| || ||||| Sbjct 1039 TGACGCTGTGACGCTGGTGGGCTTCGGTACGTTCCAGGTTCGCGCGCGTGCTGCCCGCAC 980 Query 15636 CGGCCGCAATCCGGCGACGGGCGAATCGATCCAGATCGCCG---CCAGCAAGGCCGTGAA 15692 ||||||||| ||| ||| ||||| | ||| ||||||| | | | ||| |||| Sbjct 979 CGGCCGCAACCCGAAGACCGGCGACACCATCAAGATCGCTGCATCGAACAA-TCCGT--C 923 Query 15693 ATTCAAGCCCGGCAAGGCACTGAAAGACGCCGTGAACT 15730 |||||| | ||||| || ||||| || ||||| |||| Sbjct 922 GTTCAAGGCTGGCAAAGCCCTGAAGGATGCCGTAAACT 885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120295645959678