Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq2221 872 0.0 seq3231 392 3e-104 seq3825 277 2e-69 seq1248 102 9e-17 seq340 102 9e-17 seq154 93.3 4e-14 seq9023 87.8 2e-12 >seq2221 Length=11212 Score = 872 bits (966), Expect = 0.0 Identities = 759/940 (81%), Gaps = 2/940 (0%) Strand=Plus/Plus Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994 || ||||||||||||||| | ||||| |||||| ||||| |||||||| ||| Sbjct 4108 GCGATCAACTGGAACCGCATCCAGGACGACAAGGACCTCGAGGTCTGGAACCGTCTGGTG 4167 Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAG 156054 ||||||||||||||||| |||||| | ||| |||| || ||||| ||||||||| || | Sbjct 4168 AACAACTTCTGGCTGCCCGAGAAGGTGCCGCTGTCGAACGACGTGCAGTCGTGGAACACG 4227 Query 156055 CTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGAC 156114 || ||| || |||| ||| |||||||||||||||||||||| || ||| |||| ||| Sbjct 4228 CTCACCCCCGACGAGCAGCTGCTCACCATGCGGGTGTTCACCGGTCTCACGTTGCTCGAC 4287 Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGAG 156174 || |||||||||||||| |||||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 4288 ACGATCCAGGGCACCGTGGGCGCGGTGTCGCTGATCCCCGACGCGATCACCCCTCACGAA 4347 Query 156175 GAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGAAC 156234 ||||| |||||||| |||||||||||||||||| |||||||| |||||||| Sbjct 4348 GAGGCCGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACTCCTCG 4407 Query 156235 ATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGGAG 156294 ||||||||||| || || || ||||||||||||| |||||||||||||| ||| Sbjct 4408 ATCTTCTCGACCCTCGCGTCGACGAAGGAGATCGACGAGGCGTTCCGCTGGTCCACCGAG 4467 Query 156295 AACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACCCG 156354 ||| | ||||| |||||||||||| ||||| | | ||||||| | || ||||||||| Sbjct 4468 AACCCGAACCTTCAGAAGAAGGCTCAGATCATCATGGACTACTACCAGGGCGACGACCCG 4527 Query 156355 CTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCTAC 156414 |||||||||||||| |||||||| || |||||| ||||| |||||| ||||||||| Sbjct 4528 CTCAAGCGCAAGGTGGCCTCCACCCTTCTGGAGTCGTTCCTCTTCTACTCGGGCTTCTAC 4587 Query 156415 CTGCCGATGTTCTGGTCGTCGCGAGGC-AAGCTCACCAACACCGCCGACATGATCCGGCT 156473 |||||||| | ||||| ||| |||| ||||| || ||||| |||||| ||||||| || Sbjct 4588 CTGCCGATCTATTGGTCCTCG-AAGGCGAAGCTGACGAACACGGCCGACCTGATCCGCCT 4646 Query 156474 CATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCCT 156533 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4647 CATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGCCT 4706 Query 156534 GGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTGCTGTT 156593 ||||| |||||| ||| |||| | || |||||||||||||| | ||| ||| Sbjct 4707 CGAGAACGAGACCCAGGAGCGCCGCGATGAGCTCAAGGACTACACGTTCTCGCTCATGTA 4766 Query 156594 CGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCCAGAC 156653 |||||| | |||||||||| | ||||||| |||||||||||||||| ||| | ||| Sbjct 4767 CGAGCTCTACGACAACGAGGTGCAGTACACGCAGGACCTCTACGACGGTGTCGGTCTGAC 4826 Query 156654 CGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGGGCTA 156713 ||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||| Sbjct 4827 CGAAGACGTGAAGAAGTTCCTGCACTACAACGCCAACAAGGCCCTCATGAACCTGGGCTA 4886 Query 156714 CGACGCGCTGTTCAGCCGCAGCGACTGCGACGTCAACCCGGCCATCCTGAGCGCGCTGTC 156773 ||| ||| ||||| | ||||| | |||| |||||||| |||||| || || || Sbjct 4887 CGAGGCGATGTTCCCCTCCAGCGTCACGAACGTGAACCCGGCGATCCTGTCGGCACTCTC 4946 Query 156774 GCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGTCATGGC 156833 ||| | ||||||||||||||||||||||||||||| ||| |||||||||| | Sbjct 4947 GCCGAACGCCGACGAGAACCACGACTTCTTCTCGGGGTCAGGCTCGTCGTACGTCATCGG 5006 Query 156834 CAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGA 156873 ||||| | || ||| |||||||||||||||||||||||| Sbjct 5007 CAAGGCCGAGGCCACGGAAGACGACGACTGGGACTTCTGA 5046 >seq3231 Length=6736 Score = 392 bits (434), Expect = 3e-104 Identities = 346/432 (80%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944 ||| |||||||||||||| ||||| |||||||| || ||||||||||||||| || || Sbjct 4753 CATGTTCGAGAGATTCACGGACCGAGCCCGTCGAGTGGTCGTCCTCGCCCAAGAAGAGGC 4694 Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004 | ||||||||||| |||||||| |||||||| | |||||||| || ||||||| Sbjct 4693 GAAGATGCTCAACCACAACTACATCGGGACCGAGCACATCCTGCTCGGCCTCATCCACGA 4634 Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCG 153064 ||| || ||||| ||||||||||| || || |||| |||| ||| || | ||||| Sbjct 4633 GGGTGAAGGCGTCGCCGCCAAGGCCCTCGAGAGCCTCGGCATCTCCCTCGACGCCGTGCG 4574 Query 153065 TGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTT 153124 | |||| |||| ||||||||||| || |||||| || ||||||||||||||||| Sbjct 4573 CGAGCAGGTGCAGGACATCATCGGCCAGGGTCAGCAGCAGCCGACCGGGCACATCCCGTT 4514 Query 153125 CACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCA 153184 |||| ||| ||||| || || ||||| || |||||||| |||||||||||||| Sbjct 4513 CACCCCGCGCGCCAAGAAGGTGCTCGAGCTCAGCCTCCGCGAGGCCCTGCAGCTCGGCCA 4454 Query 153185 CAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGG 153244 ||||||||||||||||||||| ||||||| | ||| |||||||||||||||||||| | Sbjct 4453 CAACTACATCGGCACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGTGAGGGCGTCGC 4394 Query 153245 CTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCA 153304 | ||||||||| || |||| |||||| || || | ||||||||||||| ||||||||| Sbjct 4393 CGCCCAGGTGCTCGTCAAGCTCGGCGCCGACCTCAACAAGGTCCGCCAGCAGGTCATCCA 4334 Query 153305 GCTGCTGTCCGG 153316 |||||| ||||| Sbjct 4333 GCTGCTCTCCGG 4322 >seq3825 Length=344 Score = 277 bits (306), Expect = 2e-69 Identities = 270/346 (78%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 156466 ATCCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAG 156525 ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||| |||| Sbjct 344 ATCCGCCTCATCATCCGCGACGAGGCTGTGCACGGGTACTACATCGGCTACAAGTACCAG 285 Query 156526 AAGGGCCTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAG 156585 |||||||| || || ||| ||||| | | || |||||| ||||||| | ||| Sbjct 284 AAGGGCCTCGAACAGCTCACCGAGGCCGAGCGTGAAGAGCTCAAGAACTACACGTTCGAG 225 Query 156586 CTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACC 156645 |||| |||||||| | ||| |||||| || |||||||||||||||||||||| | | Sbjct 224 TTGCTCTTCGAGCTCTACGAGAACGAGGTCGACTACACCCAGGACCTCTACGACGGCGTC 165 Query 156646 GGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAAC 156705 || | ||||||||| || |||||||||||||| ||||||| ||||||||| || | || Sbjct 164 GGTCTGACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGCCAACAAGGCGCTCAACAAT 105 Query 156706 CTGGGCTACGACGCGCTGTTCAGCCGCAG--CGACTGCGACGTCAACCCGGCCATCCTGA 156763 || |||||||| | || ||| ||| || ||| |||||||| ||||| |||||| Sbjct 104 CTCGGCTACGAAGGCCTCTTC--CCGAAGGACGAGACGGACGTCAATCCGGCTATCCTGT 47 Query 156764 GCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGG 156809 || || || || || |||||||| |||||||||||||| || Sbjct 46 CGGCACTTTCACCGAATGCGGACGAGAATCACGACTTCTTCTCCGG 1 >seq1248 Length=8009 Score = 102 bits (112), Expect = 9e-17 Identities = 204/297 (69%), Gaps = 19/297 (6%) Strand=Plus/Minus Query 11901 CGGTGCGCGACCTGCTGCTGGCCAAGACGCC-GA---AGGACTTCGACTTCACCACTGAC 11956 |||||||||| |||||| | ||||| || | ||| |||||||||| || || Sbjct 2436 CGGTGCGCGATGCGCTGCTCG----GACGCGTGACCCATGACCTCGACTTCACGACCAAC 2381 Query 11957 GCGCTGCCCAAAGAGATCCAGGGCATCCTGCGCGACTGGGCCGAC-GCGGTGTGGGACGT 12015 || |||| | ||||||| | |||| | | || | |||| || ||||||| | Sbjct 2380 GCCTCGCCCGACGAGATCCTGACCATCGT-CACGCCGATCTCGACCGCCCAGTGGGACAT 2322 Query 12016 CGGTGCGCGGTTCGGCACGATCGCCGCCCAGAAGGACGGCTTCGAGATCGAGATCACGAC 12075 ||| | |||||||||||||| ||| | | | || || ||||||||||||| Sbjct 2321 CGGCCGGGCGTTCGGCACGATCGGCGCGCGCGTGCAGCGCGAACAGGTCGAGATCACGAC 2262 Query 12076 ----CATGC-----GCCACGACGGTCCGGGCCGCAAGCCCGAGGTGGTGTTCACCGACGA 12126 | ||| || |||||||| | |||||||||| ||||| |||| |||| Sbjct 2261 GTATCGTGCCGACAGCTACGACGGTGTGACCCGCAAGCCCACGGTGGAGTTCGGCGACAC 2202 Query 12127 CATCATCGAGGACCTGGTGCGCCGGGACTTCACCATCAACGCGATGGCGATGCAGGT 12183 ||| || ||||| |||||||| ||||||||| ||||| | ||||| ||||||| Sbjct 2201 GATCGACGGCGACCTCGTGCGCCGCGACTTCACCGTCAACTCCATGGCCCTGCAGGT 2145 >seq340 Length=55687 Score = 102 bits (112), Expect = 9e-17 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 110993 CGGCCCTGGCCGTGGCTCCGGCGGCGGCTCGCTGGTGAACTACCTGCTGGGCATCACCTC 111052 |||||| |||||||| ||||| | ||||||||||||| || |||| |||||| Sbjct 6316 CGGCCCCGGCCGTGGTTCCGGTGCCGGCTCGCTGGTGGCCTGGGCGCTGCAGATCACCGA 6375 Query 111053 GCTCGACCCGATCAAGTACGACCTGTCGTTCGAGCGGTTCATCAACCCCGACCG 111106 |||||||||||| |||| ||||| ||||||||||||| |||||||||| || Sbjct 6376 TCTCGACCCGATCCCGTACAACCTGCTGTTCGAGCGGTTCCTCAACCCCGAACG 6429 >seq154 Length=55709 Score = 93.3 bits (102), Expect = 4e-14 Identities = 182/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 161956 CTGTGGGAGACCTTCGGCGGCACCACCAACGCCGAGGGCTACCGCGAGCTGGACCCGCAC 162015 |||||||| |||||||||||| | || || | |||||| ||||||| ||||| Sbjct 9390 CTGTGGGACACCTTCGGCGGCGTCGTCACCGACCGCGGCTACAAGCTGCTGGACTCGCAC 9331 Query 162016 ATCGGTGCCATCTACGGCGACAGCATCACGCTCGATCGCGCACAGGCGATCCTGGCCAAC 162075 |||| ||||||||||| |||||| | | || | | || || |||| Sbjct 9330 GTCGGCCTGATCTACGGCGATTCCATCACCTTGGCCCGGGGCCGGGACATTCTGGTGCGG 9271 Query 162076 CTGCAGCGTCAGGGCTTCGCTGCCAGTAACGTCGTGTTCGGCGTGGGCAGCTACACGTAC 162135 ||| || |||| || || || | ||||| || | ||| | ||| || || ||| Sbjct 9270 CTGGAGAAAAAGGGTTTTGCATCCGGCAACGTTGTCCTGGGCATAGGCTCGTATACCTAC 9211 Query 162136 CAGTACAACACCCGCGACACGTTCGGTTCAGCAATGAAGGCGACGTGGGCGCAGGTCAAC 162195 ||||| || |||||||| || || | || |||||||||||| || | |||||| Sbjct 9210 CAGTATCTGACGCGCGACACCTTTGGCTGGGCGTTGAAGGCGACGTACGCCGAAGTCAAC 9151 Query 162196 GGCAAGGGCGTGAACCTGTTCAAGGACCC 162224 ||| ||| | | | ||| |||||||||| Sbjct 9150 GGCGAGGCCCAGGAACTGGTCAAGGACCC 9122 >seq9023 Length=490 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 93649 CCCTAGAGCACGGTCTGGTAGTGCTACGGACTCTTAATCCGCAGGTCGTAGGTTCAAATC 93708 ||||| ||| | || |||||| |||||||||| |||||||||||||||||||||| | || Sbjct 445 CCCTATAGCTCAGT-TGGTAGAGCTACGGACTTTTAATCCGCAGGTCGTAGGTTCGAGTC 387 Query 93709 CTACTGGGGCCAC 93721 ||||||||| ||| Sbjct 386 CTACTGGGGGCAC 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526530422729040