Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq98 520 2e-143 seq152 470 4e-128 seq91 125 2e-24 seq447 98.7 3e-16 seq1105 84.2 6e-12 >seq98 Length=166217 Score = 520 bits (576), Expect = 2e-143 Identities = 450/565 (80%), Gaps = 4/565 (1%) Strand=Plus/Plus Query 25590 TGGAGCAAGTCTTCGCGATTGTTGCGTGGCGTGTTGACGGCGCGACTGACCCTGTACGCC 25649 || ||||| | || | ||||||| ||| |||| || ||||| ||||||| ||| ||| Sbjct 142904 TGCAGCAACTGCGCGTGGTTGTTGCTCGGCTTGTTCACCGCGCGGCTGACCCGGTAGGCC 142963 Query 25650 TCCATGGATGGAGGCGAGCTTGCCAGCAGCATCGCCATGGCATCGTCGGGGCTGGCGGCC 25709 | ||| | || ||| | || |||||||| |||||||| |||||||||| |||| | Sbjct 142964 TTCATCGCCGGCGGCTCGGACGCGAGCAGCATGGCCATGGCGTCGTCGGGGCCTGCGGTC 143023 Query 25710 ATCCACTCATCGATCTGGCCGACCTGCAGCCACACCGGCATGCGGTCGTGGATGTCGGCC 25769 | |||||||||| |||||| || |||||||| ||||||||||||||||| |||||| Sbjct 143024 AGCCACTCATCGGCCTGGCCAGCCGTGAGCCACACTGGCATGCGGTCGTGGATATCGGCC 143083 Query 25770 GAGACGCCGCTGCTGTCGCCGGTGATGATGGTGAAGGTGCCCAAGTTGCCGTCGGGC--A 25827 || ||||||||||||||||||||||| | |||||| |||||||||||| | |||| | Sbjct 143084 GACACGCCGCTGCTGTCGCCGGTGATCACGGTGAATGTGCCCAAGTTGTC--CGGGTCGA 143141 Query 25828 GCAGCGGGCTGGTGTCCTCCCACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGATGA 25887 |||| |||||||||||||||||||| |||||||| Sbjct 143142 GCAGGGGGCTGGTGTCCTCCCACAGGCCGGCGGCCAGCAGCGGCCCGGCCGAGTGGATGA 143201 Query 25888 ACCACGGGTCCTTCTTTCCGTCCTCGGGGCTGACCGACCACTCGTAGTAGCCGGCCATGG 25947 ||||||| ||||||| |||||||||| | ||||||||||||||||||| |||||||||| Sbjct 143202 ACCACGGATCCTTCTGGCCGTCCTCGGCGTTGACCGACCACTCGTAGTACCCGGCCATGG 143261 Query 25948 GGATCACGCAGCGGCGCTTCTTGAAGGCCGACCGGAAGGCTGGCTTGGTGGCCACCGTCT 26007 |||||| |||||||||||||||||| || |||||||| || ||||||||||||||||||| Sbjct 143262 GGATCAGGCAGCGGCGCTTCTTGAACGCGGACCGGAACGCCGGCTTGGTGGCCACCGTCT 143321 Query 26008 CGATCCGGGCGTTGATGGTCGAGCCTTGCAGGCCCTTGGCCTTGGCCCAGAACGGCAGCA 26067 |||| ||||| ||||| || ||||| ||||| |||||||||||||||||| || || | Sbjct 143322 CGATGCGGGCATTGATCGTGGAGCCCTGCAGCTTCTTGGCCTTGGCCCAGAAGGGGAGAA 143381 Query 26068 GGCCCCACGCCAACCGGGTGACCTGCCGGCCTTCGCCCCGGTCTAGGATCACCGATGCGC 26127 ||||||||| || |||||||||||| |||| ||| || || |||||||| || |||| Sbjct 143382 GGCCCCACGACAGGCGGGTGACCTGCAGGCCGGTGCCGCGATCAAGGATCACGGACGCGC 143441 Query 26128 GTTGCGTGGGCGCGAGGTTGTAGCT 26152 ||||||| ||||| ||||||||||| Sbjct 143442 GTTGCGTCGGCGCTAGGTTGTAGCT 143466 >seq152 Length=191884 Score = 470 bits (520), Expect = 4e-128 Identities = 486/641 (76%), Gaps = 6/641 (1%) Strand=Plus/Plus Query 25605 CGATTGTTGCGTGGCGTGTTGACGGCGCGACTGACCCTGTACGCCTCCATGGATGGAGGC 25664 ||||||||||| || ||||| || ||||| ||||||| || |||||||| | || | Sbjct 84291 CGATTGTTGCGGGGTGTGTTCACCGCGCGGCTGACCCGATAAGCCTCCATCGCCGGCAGT 84350 Query 25665 GAGCTTGCCAGCAGCATCGCCATGGCATCGTCGGGGCTGGCGGCCATCCACTCATCGATC 25724 ||| ||||||||||||||||| |||||||| || || || |||||||| || | Sbjct 84351 TCGCTGGCCAGCAGCATCGCCATAGCATCGTCAGGCGATGCCGCAATCCACTCTGCGGCC 84410 Query 25725 TGGCCGACCTGCAGCCACACCGGCATGCGGTCGTGGATGTCGGCCGAGACGCCGCTGCTG 25784 |||||| ||||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct 84411 TGGCCGGGTGCCAGCCACACCGGCATGCGGTCGTGGATATCCGCCGACACGCCGCTGCTG 84470 Query 25785 TCGCCGGTGATGATGGTGAAGGTGCCCAAGTTGCCGTCGGGC--AGCAGCGGGCTGGTGT 25842 ||||||||||| | |||||| ||||||| |||| | |||| || || |||||||||| Sbjct 84471 TCGCCGGTGATCACGGTGAAAGTGCCCAGGTTGTC--CGGGTCGAGTAGGGGGCTGGTGT 84528 Query 25843 CCTCCCACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGATGAACCACGGGTCCTTCT 25902 | |||||||| ||||||||||||||| ||||||| Sbjct 84529 CTTCCCACAGCCCGGCCGCCCAGAGCGGCCCGGCCGCGTGGATGAACCACGGATCCTTCT 84588 Query 25903 TTCCGTCCTCGGGGCTGACCGACCACTCGTAGTAGCCGGCCATGGGGATCACGCAGCGGC 25962 | |||||||| | |||||||||| |||||||| |||||||||||||||| ||| | | Sbjct 84589 TCCCGTCCTCAGCATTGACCGACCATTCGTAGTACCCGGCCATGGGGATCAGGCACCTGT 84648 Query 25963 GCTTCTTGAAGGCCGACCGGAAGGCTGGCTTGGTGGCCACCGTCTCGATCCGGGCGTTGA 26022 |||||||||||||||| ||||| || ||||| ||||||||||||||||| ||||| |||| Sbjct 84649 GCTTCTTGAAGGCCGAGCGGAACGCCGGCTTAGTGGCCACCGTCTCGATGCGGGCATTGA 84708 Query 26023 TGGTCGAGCCTTGCAGGCCCTTGGCCTTGGCCCAGAACGGCAGCAGGCCCCACGCCAACC 26082 ||||||| || ||||| ||| ||||| |||||||| |||||||||||||| |||| || Sbjct 84709 TGGTCGACCCCTGCAGCTTCTTTGCCTTCGCCCAGAAGGGCAGCAGGCCCCAGGCCAGCC 84768 Query 26083 GGGTGACCTGCCGGCCTTCGCCCCGGTCTAGGATCACCGATGCGCGTTGCGTGGGCGCGA 26142 | | |||| |||| ||||||||||| || | ||| | ||||| || || ||||| | Sbjct 84769 GCTCCAGCTGCAGGCCGTCGCCCCGGTCCAGCACCACGGCCGCGCGCTGTGTCGGCGCCA 84828 Query 26143 GGTTGTAGCTGGGCTGGATCTCGGCCAGGCCGGGGGCAAGGT-CAGCCAGCCCCGGCTGG 26201 |||||||||||| | | ||| |||| || | || | | | ||| |||||| Sbjct 84829 GGTTGTAGCTGGCCGGCATCGACAACAGGTCGCCCACCAGCTGGGGGAAACCCAGGCTGG 84888 Query 26202 CCGAAGTCGACAACGGGGAGCTGGACGAATCGGCCGCACAT 26242 || ||| | ||| ||||||||||||||||||||| Sbjct 84889 -CGGCGTCTCGGATCGGGGTCTGGACGAATCGGCCGCACAT 84928 Score = 159 bits (176), Expect = 9e-35 Identities = 162/210 (77%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 25601 TTCGCGATTGTTGCGTGGCGTGTTGACGGCGCGACTGACCCTGTACGCCTCCATGGATGG 25660 ||||| |||| | || || | || || || || ||||| | |||| |||||| | || Sbjct 83189 TTCGC-ATTGCTCCGAGGTGAATTTACAGCACGGCTGACTCGATACGTCTCCATCGCCGG 83247 Query 25661 AGGCGAGCTTGCCAGCAGCATCGCCATGGCATCGTCGGGGCTGGCGGCCATCCACTCATC 25720 ||| ||| || |||||||||||||| || || ||||| ||||| ||||| || Sbjct 83248 CGGCTCGCTGGCGAGCAGCATCGCCATAGCTTCATCGGGCGAAGCGGCAATCCATTCCAT 83307 Query 25721 GATCTGGCCGACCTGCAGCCACACCGGCATGCGGTCGTGGATGTCGGCCGAGACGCCGCT 25780 | ||| || | ||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 83308 GCCCTGTGCGGGGTCCAGCCACACCGGCATGCGGTCGTGGATATCGGCCGACACGCCGCT 83367 Query 25781 GCTGTCGCCGGTGATGATGGTGAAGGTGCC 25810 ||||||||||||||| | ||||||||||| Sbjct 83368 GCTGTCGCCGGTGATCACTGTGAAGGTGCC 83397 Score = 138 bits (152), Expect = 3e-28 Identities = 383/575 (67%), Gaps = 13/575 (2%) Strand=Plus/Plus Query 24862 CTGCTACGTCGAGGCATTCGCCGGCGGTGCCGCGTCGTTGCTTAT-GCG-GCCGTACCCA 24919 |||||| ||||| || || || ||||| |||| || |||| | ||| ||| | || Sbjct 59269 CTGCTATGTCGAAGCGTTTGCGGGCGG---CGCGGCGATGCTGTTCGCGCGCC--AGCCG 59323 Query 24920 GCACAGATGGAGGTGCTCAACGACATCAACGGCGAGCTGGTGTCCCTGTACCGCTGCGT- 24978 || | | || ||||| ||||||| | |||||||| || || ||| | ||| Sbjct 59324 GCTAGGGTTGAAGTGCTGAACGACACACATGGCGAGCTCGTACGGCTCTACAGGGTCGTT 59383 Query 24979 GCGCCACCACCTGGATGAGTTCGTGCG-CATGTTCCGCTGGTCCCTGGTCTCGC-GACAG 25036 ||| |||||||||| |||||||| || ||| ||||| ||||| || || || | | Sbjct 59384 GCGA-ACCACCTGGACGAGTTCGTACGGCAT-TTCCGGTGGTCGTTGA-CTAGCCGGGAA 59440 Query 25037 ATGTTCGAGTGGGCACAGATGGAGCGCCCGGAGACGCTGACCGACATCCAGCGCGCAGCG 25096 |||| | ||||| ||| | || | ||||||||| || ||||| |||||||| ||| Sbjct 59441 ATGTACCGCTGGGCCCAGTTACAGAACGTGGAGACGCTCACAGACATTCAGCGCGCTGCG 59500 Query 25097 CGGTTCTACTACCTGCAAAAGCTGGCATTCGGCGGCAAGGTGCAGGGGCAATCGTTCGGT 25156 |||||||| ||||| || ||||| | || ||||| ||||| || || || | || Sbjct 59501 CGGTTCTATTACCTCCAGAAGCTTTCCTTTGGCGGTAAGGTCACTGGCCAGACGCTTGGC 59560 Query 25157 GTGGTGACGGCTGGTGGGCCGCGATTGAACCTTCTGCGCATTGAAGAGGAACTGAGCGCG 25216 |||| | || ||| | ||| | ||||| ||||| | || | || || |||| Sbjct 59561 GTGGGGCCGACTGCGGCAAAGCGCATCAACCTGCTGCGGCTCGAGCAAGACCTCAGCGAT 59620 Query 25217 GTGCATCTTCGCCTGGCAAACACCGTAATCGAGTGCCTGCCATGGCAGGAGTGCGTGCGG 25276 | ||| || || ||| | ||| | ||| ||||| ||||||| ||||||| | Sbjct 59621 GCGCACCTGCGTCTGCATGGCGTCGTGGTGGAGAACCTGCAATGGCAGAAGTGCGTCAAG 59680 Query 25277 CGCTACGATCGCCCGGGAACACTGTTCTACCTTGATCCGCCCTACTGGGAAACCGAGGGC 25336 ||||| | ||| || ||| ||||| || || ||||||| || ||||| Sbjct 59681 AAGTACGACACCGATTCAACGCTCTTCCTTCTTGACCCCCCTTACTGGGCGACTGAGGGA 59740 Query 25337 TATGGCGTTGAGTTCCCGTTTGCTGAGTACGAGGCGATGGCCGAGCTGATGCGCACCTCG 25396 ||||||| || ||| | | ||||| || | |||||| | ||| | ||| | Sbjct 59741 TATGGCGGAGATTTCGGACTGGAGCAGTACCGGGAGCTGGCCGCGACCATGGGTGCCTTG 59800 Query 25397 GCTGGCCGGTTCGTGGTCTCGATCAACGACCATCC 25431 || || | | | |||||||||||||||| Sbjct 59801 AAAGGAAGGGCCATCCTGACGATCAACGACCATCC 59835 >seq91 Length=139565 Score = 125 bits (138), Expect = 2e-24 Identities = 280/409 (68%), Gaps = 21/409 (5%) Strand=Plus/Plus Query 28737 GCGGAAGCCGTGGCCGGTCAT--CATCGTGCGGTCGTAACCCATGTTGCGCAGCGCTGCG 28794 ||||||||||||||||||||| ||||| ||| || |||| ||||| || || Sbjct 69835 GCGGAAGCCGTGGCCGGTCATTTCATCGC-CGGAA-TAGCCCAGCGCGCGCAAGGCGGCA 69892 Query 28795 GTAACGGCGTTCTCTGACATCGGGCGTTTGGAATCGCGGGCGC----CAGAGAACACCCA 28850 | | || |||||| ||||| ||||| || ||||||| | | ||| || Sbjct 69893 TTGATGGTGTTCTCCGACATAGGGCGATT-------CGGGCGCAGACCGGGGAATACATG 69945 Query 28851 CTTGTGCCGGCCGGTGATCGGCTTG-ATGTCCTCCAGGATCTGCAGCGCCTGCCTGGACA 28909 | | | |||||| | ||| || | ||| ||||||| || ||||| ||||||| Sbjct 69946 CGGGCCACTGCCGGTCAG-GGCATGCAGGTCACGCAGGATCGCCACGGCCTGGCTGGACA 70004 Query 28910 GCGGCACCAGGTGCGCAGCACGCATCTTCATCTTGCT-GGCAGGGATGGTCCACACGGCC 28968 || ||||||||||| || ||||||||| ||| || ||||| ||| | |||| Sbjct 70005 AGGGGACCAGGTGCGCCGCCTTCATCTTCAT-GCGCTCGGGCCGGATGCGCCAGATGGCC 70063 Query 28969 GCGTCGAGGTCGAACTCCTCCCATTCCGCATGCCGCAGTTCGCCAGGACGCAGGAACACC 29028 || || || |||| || |||||||||| |||||||| || || |||| |||||| Sbjct 70064 GCATCCAGATCGATTTCTCCCCATTCCGCCGCGCGCAGTTCCCCTGGGCGCACGAACACG 70123 Query 29029 AGCGGCGCCAGCCGCAGCGCCGCGCGTGTGATGGCAGATCCGCTGTATGC-CTCGATGGA 29087 ||||| ||||||| || |||||| | || | | || || | || |||||||| Sbjct 70124 AGCGGTGCCAGCCTCAACGCCGCCTGGGTAACCACCTGGCC-TTGGAAGCTCTCGATGGC 70182 Query 29088 GCGCAGCAGGCCACCCAGCTGCACGGGGTCAGTAATCGCCGCATGGTGG 29136 ||||| || || | || |||| ||||| || || ||||||||| Sbjct 70183 GCGCAATAGCTGGCCGATCTTGGCGGGCTCAGTGATGGCGGCATGGTGG 70231 >seq447 Length=48793 Score = 98.7 bits (108), Expect = 3e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 10063 TCCGGGCCTTGGGCAAGACCCTGCTCACCTACCAGCGCAAGCATGGCCTGCGAACGGTGA 10122 |||| ||| |||||||| ||||| ||||| ||||||||||| || | || |||| Sbjct 37317 TCCGTGCCCTGGGCAAGCTGCTGCTGACCTATCAGCGCAAGCACGGGTTAAAGACCGTGA 37376 Query 10123 AGGAGATCATCGGTCGCTGGGCGCCACCGGTGGAGAACAACACCACCGCATACGTGC 10179 ||| ||||||| ||||||||||||| | ||||||||| | ||| | || ||||||| Sbjct 37377 AGGCGATCATCAGTCGCTGGGCGCCGTCCGTGGAGAACGATACCGCTGCCTACGTGC 37433 >seq1105 Length=92187 Score = 84.2 bits (92), Expect = 6e-12 Identities = 143/201 (71%), Gaps = 10/201 (5%) Strand=Plus/Plus Query 583 AAGGAGTACTGGCCGGCCGGTATGGTCAAGAAGGGCCACTTCCACCTGATCGGCGGA--- 639 ||| ||||||||||| |||||||| || ||||| || |||||||| ||| Sbjct 7097 AAGCAGTACTGGCCGCCCGGTATGTCTAAAGAGGGCGCTTTTCACCTGATTGGCCCTCAC 7156 Query 640 --AGTCCCCAGTGGATCT-TGCTGGTGGCCGAGGGCTACGCCACTGCGGCCACGCTGCAC 696 || ||| | | | | |||||||| |||||||||||||| | || | |||||| Sbjct 7157 CCAGAGCCCGGCGAACCGGTGCTGGTGTGTGAGGGCTACGCCACGGGCGCAAGCCTGCAC 7216 Query 697 ATGGCTACG-GGCTACCCGGTGGCCGTGGCGTTCGATGCCGGCAACATGCTGGCCGTCGC 755 ||||| ||| ||| | | || ||| | || ||||| || |||||| ||||| | ||| | Sbjct 7217 ATGGCGACGTCGCT-CACTGTCGCCATCGCCTTCGACGCGGGCAACCTGCTGCCTGTCTC 7275 Query 756 CTCGGCCCTG-GCGAAGCGCT 775 | |||| || ||| |||||| Sbjct 7276 CAAGGCCATGCGCG-AGCGCT 7295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128781005245926