Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_011611.1 Length=36885 Score E Sequences producing significant alignments: (Bits) Value seq757 567 2e-157 seq447 98.7 2e-16 >seq757 Length=83746 Score = 567 bits (628), Expect = 2e-157 Identities = 1128/1642 (69%), Gaps = 49/1642 (3%) Strand=Plus/Plus Query 177 ATCCAGCGGCCTGCCCATACCACGCGACCAATGATGTCGATTGCCTCTAGGTCTTGCTTG 236 ||||| | ||| |||||||| ||||| ||||| || || | | | | | | | || Sbjct 48700 ATCCAACCGCCAGCCCATACTACGCGGCCAATTATCTCCAGGTCGTTCAACTTATCCCTG 48759 Query 237 G--ACACGTACATCGTCTGGTAGGCCGAATTAGCGCTAATGATCGC--TAGACCGCCATT 292 | ||| | |||| |||||||| || | || ||||| |||||| | | Sbjct 48760 GGGACAACCATATCGC--GGTAGGCCTTGTTCTCACTGATGATGTGAATAGACC--CGTC 48815 Query 293 GATTTGCCGCTGGATTCGCTTGGCGTATAGGTGGTCATCCAACCGAATGACGTAGATAGC 352 || |||||||||| | || || || || |||||||||| ||| |||||||| | ||| Sbjct 48816 GAACTGCCGCTGGAGCCTTTTCGCATAGAGATGGTCATCCAGCCGGATGACGTATACAGC 48875 Query 353 CTCGTCGCGGACCTCGCCGCAGCTGTGGTCAATCATCACCGTATCACCATCGCTCAACAG 412 ||| | | | || || |||||||||||||||||| ||||| |||||||| | || Sbjct 48876 CTCTCCCTCAAGCGAGCTGCGGCTGTGGTCAATCATCACAGTATCGCCATCGCTTAGAAG 48935 Query 413 CGGCTCCATTGAGTCACCGCCGATGCGAACGGCTGACATATTCGCTATCTCCAGACCTTG 472 |||||| || || ||| | | || | || |||| ||| ||||| ||||| Sbjct 48936 TCCCTCCATCGAATCCCCGTCCACTCGGATTGCGGACAGTCGCGCAGAGTCCAGGCCTTG 48995 Query 473 CTTCCGCAAGC-TGTA-GCGAGTGAACGCCAGCTTGGCCAAGGTCCG-CGCGCCCTCCAT 529 ||| || |||| ||| ||| |||||||| ||| ||| ||| | | || || || | Sbjct 48996 CTTGCG-AAGCGAGTACGCG-GTGAACGCAAGC-TGGGTTAGGACAGTAGCCCCTTCGCT 49052 Query 530 CCAGGAACCGTGGCCAGCACTCACCCGCGCGTCGTAGAGGGGTACGTAGGCGTAGGTGTC 589 ||||| ||||| || ||||| | |||||||| | || ||||| ||||| |||| Sbjct 49053 CCAGGCGCCGTGTCCCGCACTACAGTGGGCGTCGTACAAAGGCACGTAAGCGTACTTGTC 49112 Query 590 ATCCTCTGCGGCTTCATCCGGG--GCAGCGCTGTGCA---TTTCCCCCTCCCCGGTAGCT 644 ||| | || | ||| ||||| | | || | |||||||| || | ||| Sbjct 49113 CTCCGCAATGG-----ACTGGGAAGCAGCTCCCTTCAACTTGTCCCCCTCGCCTGAAGCA 49167 Query 645 AGCCAGCCAATGTCCACCCCCGCAGCCTTTGCAATGTCCACACACCGCGCAAGCTTGGGT 704 |||||||||||||| || || | ||||| || ||||| ||||||||||| | |||||| Sbjct 49168 AGCCAGCCAATGTCGACGCCGACCGCCTTAGCGATGTCTACACACCGCGCTACCTTGGGC 49227 Query 705 TCACTGTCGCCGGTCAAGTAGTACTCCAGGGTACGCCTAGGGATAGCGGTTAGTCGCGCG 764 ||||| | ||||||| ||| ||||| ||||| || | ||||||||||| |||||||| Sbjct 49228 TCACTCTGCCCGGTCAGGTAATACTCAAGGGTGCGTCGTGGGATAGCGGTAAGTCGCGCC 49287 Query 765 AGTTCATCGCCACTTCCAACCAAGGCGGCGCAGGTTCTAATCCGAGCAGCCAGACCTTCG 824 | |||||||||||||| | | | ||||| | || || | ||||| |||||| Sbjct 49288 AACTCATCGCCACTTCCCGCTATCTCAGCGCATTGCCGGATACGTTCCGCCAGCCCTTCG 49347 Query 825 GTCATTTCGCTTTCCCCTCAGAAGAAAGCGAAA-TGCAGCCAAGAAAAATAGCTAAATTT 883 ||||||||||||| || || | ||||| ||| || | | || ||| |||||| Sbjct 49348 CTCATTTCGCTTTCTCCCTTGAGCTATCCGAAACGGCATCCCTGCACAA-AGCGAAATTT 49406 Query 884 CGCTTTGTC-AGGAAGCCTTTAGATATCAATGACTTAGCCAATTCTCGCCTCTTTATTGA 942 |||||| || | ||||| ||| | ||||| || ||| ||| || | | | Sbjct 49407 CGCTTTCTCGATAAAGCC-TTACAGATCAAAGAGATAGACAAAATCAACCACCATCAAGC 49465 Query 943 TAAATCTGGCAAGCGAAACGCCATTTTTCGCTTTACCAGCTGGCTGTTAATGGCTATGTT 1002 ||| ||| |||||||| ||||||||||||||||||| | | | | |||||||||| Sbjct 49466 CAAAGATGGAAAGCGAAAAGCCATTTTTCGCTTTACCACATAGTTATATTTGGCTATGTT 49525 Query 1003 TATGCCCTAAGTCACGTTAGACAACCCAAGTAGTCGCCCTGCATGGCGGCT-GAAATGGA 1061 ||||||||| || |||||||||| ||||| | | |||| || || | |||||| Sbjct 49526 TATGCCCTAGGTAACGTTAGACATCCCAAAAAACCACCCTTGCCGGTGGTTATGAATGGA 49585 Query 1062 ACGTAGGCATGAACAGAACCGAAATCCCCCGCGACAACAACGTCCGCTGGGAGTGGATCA 1121 |||||||||||| |||||||||||| | ||| | | | || ||||| ||||||| Sbjct 49586 CGCTAGGCATGAACAAAACCGAAATCCCGCTTGACCCAACCCTGCGATGGGAATGGATCA 49645 Query 1122 AATACCAGCTCCGTGCCAGGGGGTCGTCCCTGGCTGAGGTGGCCCGCTCCCTCGACGTCT 1181 ||||||| || ||| || | || |||| || || |||| || || ||||| | Sbjct 49646 AATACCAACTTCGTACCCGAGGTACGTCACTCGCAATCTTGGCGCGTGAACTTGACGT-T 49704 Query 1182 CCAG-CCCGGCAGTCAAAAACGCCAAGCTGACTCCCTACCCTCGGGTAGAGCGCGCCATA 1240 ||| | || ||||| ||||| |||| || | || || || | ||||| || || Sbjct 49705 ACAGATGCTGCCGTCAAGAACGCTAAGCGCACCGCATATCCGCGAATGGAGCGAGCTATT 49764 Query 1241 GCTGCTGTACTCGACCTCAGCCCGCTAGTGCTGTGGCCAGAGCGCTGGCTAGACGACGAG 1300 || || || | ||||| || | | ||||||| || || ||| | ||| Sbjct 49765 GCCCGTGCGCTAGGCCTCAAGCCAATCGACTTGTGGCCCGAACGTTGGAACGCAAACGGC 49824 Query 1301 AATCCGAAGCGGCAACGGCCGAATCGCTCGGAGACCTTGCAGGCATATGTCAGACATATG 1360 | || | || ||| | | ||| | || || | ||| | || || | Sbjct 49825 ACCCCACACCGTATTCGGGTGCAGCGCGCAGA-AC--ACAACGCA-ACTTC-----TA-G 49874 Query 1361 CCAGGTGCTGAGGAAAATACCAGATACGCTGACCAAGCGCAGCGTAAAGCCGGCGCGGGG 1420 ||| | || | | |||| | || || || |||||| ||||| ||| | Sbjct 49875 CCAAGAGC------ATAACCCAGCT--TATGCCCTTCGACACCGTAAAACCGGCACGGAG 49926 Query 1421 GCTTGAACATGGCCCGCCGCAAAGACGATCGAACGCTGGACATCTTCGATGTTCCGCAGC 1480 | | |||||| ||| || || ||||| ||| | ||||||||| ||| || |||| Sbjct 49927 GTATAAACATGCGCCGTGTAAAGGATGATCGTACGTTAGACATCTTCTCTGTCCCACAGC 49986 Query 1481 CGGCCCTCGCTATACCTGGTGAGTGCAACTACGCCGCTCAAGTCAGCGAACTGGTCAGCG 1540 | | || ||||| || || | ||||| | ||||| || ||||| |||||| |||||| Sbjct 49987 CAGTTCTGGCTATCCCAGGGAATGGCAACAATGCCGCACAGGTCAGTGAACTGATCAGCG 50046 Query 1541 AAATTCTGAAGGCTTGCGACCTTGACCGTTACGAGGTCGCCGCCCGGATGTCGCGCCTGT 1600 | |||||||| | || ||| || ||||||||||| | | || || ||||| ||| ||| Sbjct 50047 AGATTCTGAAAGGTTCCGATCTGGACCGTTACGAAATTGGTGCACGCATGTCTCGCTTGT 50106 Query 1601 CCGGCGATGACGTGAGCAAGAACATGCTCGACGCCTGGTCGAGTCCCGCCCGAACTGATC 1660 | |||||||||||||| ||| ||||||| ||||| |||||||| || |||||||| || | Sbjct 50107 CTGGCGATGACGTGAGTAAGCACATGCTTGACGCGTGGTCGAGCCCAGCCCGAACAGACC 50166 Query 1661 ACAACTTGCCTTTCTACCGCGCCGCCCTTCTGGAGGACGTCTGCGCGAGCCATCTGCTGA 1720 | ||| |||| ||||| | ||| | || || || || || || || || | | | Sbjct 50167 ATAACCTGCCGTTCTATAGAGCCCCACTGCTTGAAGAAGTTTGTAGCAGTCACGTTTTAA 50226 Query 1721 CCAACTGGCTGGTCGATGTACGTGGCGGCCGCGTGGCTTACGGCCGCGATGCACTGCTCG 1780 || |||||||||| || |||||| ||||||||||||||||| ||||||||||| || Sbjct 50227 CCGACTGGCTGGTTGAGCAACGTGGTGGCCGCGTGGCTTACGGTCGCGATGCACTCAACG 50286 Query 1781 CCGAACTGGGCCGCCTTGAGCG 1802 | || || || || || | ||| Sbjct 50287 CGGAGCTTGGTCGTCTGGCGCG 50308 Score = 131 bits (144), Expect = 4e-26 Identities = 122/152 (80%), Gaps = 5/152 (3%) Strand=Plus/Plus Query 9443 CATTGAGCGAAACCGCCCCGGCCTGGCCGGGACGGTCTGCCGGACGTGGTAGTCCGGTAC 9502 |||| ||||||| ||||||||| | | ||| |||||||||||||||||| ||||||||| Sbjct 56939 CATTAAGCGAAATCGCCCCGGCGCG-CTGGGGCGGTCTGCCGGACGTGGTTGTCCGGTAC 56997 Query 9503 TGATGAGCAGCCACCCATGACGAACGAA--ACCAAGACAGACCGCCAGCGCCGCCTGGCG 9560 ||||||||||||||||||||| ||||| ||| | |||| ||| | ||||||||| Sbjct 56998 TGATGAGCAGCCACCCATGACAGACGAAACACCCAAACAG--CGCAAAACCCGCCTGGCA 57055 Query 9561 CGGGAACGCCAACGGGCGAAGCGCGAGCGCGA 9592 | || || |||| || ||||| ||||||| Sbjct 57056 TGCGAGCGTAAACGTGCCCAGCGCAAGCGCGA 57087 Score = 127 bits (140), Expect = 5e-25 Identities = 221/321 (69%), Gaps = 9/321 (3%) Strand=Plus/Plus Query 9839 AAAATCCACATCGCCAAGGCCCAGCTGGGCATGGACGATGACACCTATCGCGCATTGCTC 9898 || ||||||||||||||| | || || |||| || || ||||| || || ||| | Sbjct 57316 AAGATCCACATCGCCAAGAAGGACCTTGGGCTGGATGACGAAACCTACCGGGCCTTGTTG 57375 Query 9899 GCTCGCGTCGCGGGCGTGCGCTCGGCCAAGGACTTAGGGCCGCGCCAGATCGACCACGTA 9958 | ||||| ||||| ||||| |||||||| ||| | ||| |||||||||| | ||| Sbjct 57376 GGCCGCGTGGCGGGTGTGCGTTCGGCCAAAGACCTGACGCCACGCCAGATCGGCGCTGTA 57435 Query 9959 CTGGTCGAACTCCAGCGCCTGGGCTGG------AAACCGAAGAGCAACCGGCAAGGCCGG 10012 |||| ||| | ||| |||||||| ||||||| | || ||||||||| Sbjct 57436 CTGGCCGAGTTTGCCCGCTTGGGCTGGGAGTCTAAACCGACTAAAAA---GCAAGGCCGC 57492 Query 10013 GCGACGCCAAAAGTGCCGCAAAACCGGCAAACCGTGCTGCGTAAAATCACCGCGCTCCTG 10072 | || | | | ||| | ||||| || || || ||||||| || | || Sbjct 57493 AAGGGACCGATGGCGGCGCCAGACCGGGTAAAGCTGGTGGGTAAAATAGAGGCTTTTCTC 57552 Query 10073 GCCAGCGCCCATCGCCCCTGGAGCTACGCCGACCACATGGCCCGGCGCATGTTCCAGGTC 10132 ||| ||| | ||| ||||| || |||||| ||||||| |||||||||| ||||| Sbjct 57553 GCCGAGGCCAAACGCTCCTGGGCATATGCCGACGGTATGGCCCTGCGCATGTTCAAGGTC 57612 Query 10133 GAGCGGGTCGAGTGGCTGGAC 10153 ||||| || || ||||| ||| Sbjct 57613 GAGCGAGTGGAATGGCTAGAC 57633 Score = 86.0 bits (94), Expect = 1e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 6895 GCCTGGGGCGAGCGTCCGCCCGTCTTCGTCCAACTGCTGGCCGCCGAGGTGGCCCGCAGC 6954 || |||||| || |||| | ||||| | ||||| |||||||| || || || | Sbjct 53781 GCTTGGGGCCAGGACGCGCCGTTGTTCGTACGCCTGCTCGCCGCCGAAGTCGCTGCCACC 53840 Query 6955 AGCCAGACGAAAGCCGGCGAGGCAATCGGCATGAGCCGTTCGACTGTCAGCACCATCCTC 7014 | | |||| || ||| || || |||||||||||||| || | |||||| | ||| Sbjct 53841 AACAAGACCAAGGCCAGCCAGCGTATCGGCATGAGCCGCACGGCCGTCAGCCTGACCCTT 53900 Query 7015 GCCAACCGCTACCCGTCACCCTCGACGATCCGCGTCGAGCGTCGTGTCCTGGCCGCGCTG 7074 |||||||||| |||| ||| | | | || ||||| || || ||| | ||| Sbjct 53901 TCCAACCGCTATGCGTCGCCCAGCATGGCGGGTGTTGAGCGGCGGGTAATGGAAACCCTG 53960 Query 7075 AGCCGCATTGAGTGCCCGGCCCTGGGCGAGGCGGTGACCTCGGTCGAGTG 7124 | |||||||| || ||||||| |||| | || ||| ||| | |||| Sbjct 53961 GGGCGCATTGAATGTGTCGCCCTGGACGAGACCGTTACCACGGACCAGTG 54010 >seq447 Length=48793 Score = 98.7 bits (108), Expect = 2e-16 Identities = 169/241 (70%), Gaps = 11/241 (5%) Strand=Plus/Plus Query 11530 AACCTCGCGGCATCCGCAACAACAACCCCGGCAACATCGTTTGGTCGGCACG--CAACAA 11587 |||| ||||| | |||||| ||| ||||||||||||| || || | || |||| | Sbjct 37186 AACC-CGCGGGGTGCGCAACCGCAATCCCGGCAACATCGATTA--CGTCCCGGCCAACCA 37242 Query 11588 CTGGCAGGGCCAGCTCCCGCACAACCCGAAGATCGAGCCCCGATTCGCCCGCTTCGACAC 11647 ||||| ||||| || | ||||| || ||| || || ||||| || || || Sbjct 37243 ATGGCAAGGCCAACTGAAACCAGACCCGGCTATAGAGAAACGCTTTGCCCGGTTTGATAC 37302 Query 11648 CGCGCATAACGGCATCCGCGCCCTGGCAAAGCTGCTGCTGAACTAT---CGCAAGGTCCA 11704 || | ||||||||||| ||||||| ||||||||||||| |||| |||||| || Sbjct 37303 GCCGGAAAACGGCATCCGTGCCCTGGGCAAGCTGCTGCTGACCTATCAGCGCAAG---CA 37359 Query 11705 CGGCCTGCGCACCGTCGAATCGTTGATCGCACGCTGGGCGCCATCCAACGAGAACGACAC 11764 ||| | ||||| | || | ||| ||||||||||| ||| |||||||| || Sbjct 37360 CGGGTTAAAGACCGTGAAGGCGATCATCAGTCGCTGGGCGCCGTCCGTGGAGAACGATAC 37419 Query 11765 C 11765 | Sbjct 37420 C 37420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117895940279178