Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq374 86.0 6e-12 >seq374 Length=102525 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | | || || || || || || ||||| |||||||| ||||| Sbjct 422 ATACCTCCACGGAGGCGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCC 363 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | ||| ||||| ||| | || | || |||||||| || Sbjct 362 GAGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCAGCGAAAATTAGACGCTGCTGGTCGGGG 303 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || || || || | || | || | ||| || || || Sbjct 302 GGGATGCCCTCCTTGTCCTGGATCTTAGTCTTTA-CGTTCTCAATGGTATCCGAGCCTTC 244 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||||| | || ||||| || || || || ||||| |||||||| Sbjct 243 GACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451944852036920