Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq35 201 5e-47 seq401 116 1e-21 >seq35 Length=166930 Score = 201 bits (222), Expect = 5e-47 Identities = 252/338 (75%), Gaps = 17/338 (5%) Strand=Plus/Minus Query 9109 GCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCC 9168 |||||||||| || ||||||||||| ||||| ||||| || || |||||||||| || Sbjct 116073 GCATGGCATCGGTTAACAAAGTCATTCTCGTGGGCAACCTGGGTCGCGACCCGGAAGTCC 116014 Query 9169 GCTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTC--TCGCGACGACCGATCG--C 9224 ||||| ||| ||| | |||||||| ||| || ||| |||| || ||| ||| | Sbjct 116013 GCTACAGCCCCGACGGGGCCGCAATCTGCAACAT--GTCCATCGCCACCACC--TCGTCC 115958 Query 9225 TACAAGGACAAGGCGAGCGGCGAGTTCAAG---GAAGTGACCGAGTGGCACCGCGTCGCT 9281 | ||||||||||| ||||||||| ||| |||| ||||| ||||||||||||| Sbjct 115957 TGGAAGGACAAGGCCAGCGGCGAG---AAGCGCGAAGAAACCGAATGGCACCGCGTCGTC 115901 Query 9282 TTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTAC 9341 | | |||||| ||||| |||| || ||| |||| |||||| ||||||||| Sbjct 115900 ATGTATAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGCTCGGTCTAC 115841 Query 9342 ATCGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCA--AT-CCGGCCAGGATCGCTAC 9398 ||||| || || | ||||| || |||||||| || | || ||||| ||||||||| Sbjct 115840 ATCGAAGGCCGTCTGAAGACCCGCAAGTGGCAAGACAAGGATACCGGCGCCGATCGCTAC 115781 Query 9399 ACGACCGAGATCGTCGCCGACAGGATGCAGATGCTCGG 9436 | ||||| |||||||| ||| |||||||||||| || Sbjct 115780 AGCACCGAAATCGTCGCTGACCAGATGCAGATGCTGGG 115743 >seq401 Length=77198 Score = 116 bits (128), Expect = 1e-21 Identities = 210/303 (69%), Gaps = 7/303 (2%) Strand=Plus/Minus Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178 |||||||||||| || ||||||||||| ||||| |||||||||| ||||||| ||| Sbjct 66639 CGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCC 66580 Query 9179 GAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGC 9238 || |||| |||| | | || || || || || | ||| ||| || || ||| Sbjct 66579 GAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCA 66520 Query 9239 GAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGC 9298 || |||| || |||| ||||||||||||||||| | ||||||||| |||| Sbjct 66519 GACCGGCCAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATCGC 66460 Query 9299 CGAGATCGTCGACGAGCACCTTCG-CAAGGGCGCATCGGT-CTACATCGAGGGGCGCATC 9356 ||| |||| | ||| | || || ||||| || | || |||| |||| || || Sbjct 66459 CGAAATCGCGGGTGAGTATCTGCGAAAAGGGAGC--CAGTGCTACGTCGAAGGCACTCTC 66402 Query 9357 AAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCGCC 9416 || || |||| ||| || ||| | | |||||||| ||||||||||||| | Sbjct 66401 CGCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCGTC 66345 Query 9417 GAC 9419 ||| Sbjct 66344 GAC 66342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200537957052972