Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_013650.1 Length=155445 Score E Sequences producing significant alignments: (Bits) Value seq3559 98.7 1e-15 seq340 93.3 4e-14 seq375 84.2 2e-11 >seq3559 Length=12351 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 113818 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 113877 || |||||||||||||| | | || ||| ||||| | |||| ||| |||||| Sbjct 3516 GGGCCGGGCCGTGGCTCGGGTGCCGGGTCGATGGTCGCGTACGCGATGAAGATCACCGAC 3575 Query 113878 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 113937 ||||||| || | ||| |||||| |||||||||||| ||||||| ||||| | | Sbjct 3576 CTCGACCCACTCGAACACGGCCTGATCTTCGAGCGCTTCCTCAACCCCGACCGTGTCTCC 3635 Query 113938 TTCCCCGACATCGACGTCGACTTC 113961 | |||||| |||||||||||||| Sbjct 3636 ATGCCCGACTTCGACGTCGACTTC 3659 >seq340 Length=55687 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/147 (75%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 113817 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 113876 |||||| |||||||| |||| | ||||||||||| ||| | || |||||| Sbjct 6316 CGGCCCCGGCCGTGGTTCCGGTGCCGGCTCGCTGGTGGCCTGGGCGCTGCAGATCACCGA 6375 Query 113877 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC--CCC 113934 ||||||||||| |||| ||||| |||||||||| ||| ||||||| || ||| | Sbjct 6376 TCTCGACCCGATCCCGTACAACCTGCTGTTCGAGCGGTTCCTCAACCCCGAACGCGTGTC 6435 Query 113935 GACTTCCCCGACATCGACGTCGACTTC 113961 || | |||||| ||||| |||||||| Sbjct 6436 GA--TGCCCGACTTCGACATCGACTTC 6460 >seq375 Length=82088 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 113818 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 113877 ||||| ||||| || |||| || || |||||||| | |||| ||||||| ||| Sbjct 20604 GGCCCCGGCCGGGGTTCCGGCGCCGGTTCGCTGGTGGCGTACGCGCTGGGCATTACCGAC 20545 Query 113878 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 113937 | ||||||||| |||||| || |||||||||||||| | || || || || | | Sbjct 20544 CTGGACCCGATCCGCTACGACTTGCTGTTCGAGCGCTTCCTGAATCCCGAGCGGGTCTCC 20485 Query 113938 TTCCCCGACATCGACGTCGACTTC 113961 | |||||| |||| |||||||| Sbjct 20484 ATGCCCGACTTCGATATCGACTTC 20461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497231805302600