Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1288 116 6e-21 >seq1288 Length=22276 Score = 116 bits (128), Expect = 6e-21 Identities = 376/575 (65%), Gaps = 19/575 (3%) Strand=Plus/Minus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 || || || |||||||||||||| || |||||||| || ||| | |||||| || | | Sbjct 679 AGCAGACAGGCAAAGTCGCAGTGGAGGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGAAG 620 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA 160036 ||||||| |||||| || ||| |||||||| || || | ||| || | | | | Sbjct 619 GTGAGGCCGTGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCG-AGCAGAACGAGCCCGA 561 Query 160037 -AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGT 160095 || ||||| ||||| ||||| |||||||| ||||| | ||| | |||| ||| | Sbjct 560 GAAGAAGATGCCCTCGACGGCGGCAAACGCGACGAGGCGCTCGGC-AAAGCTGCG--CGA 504 Query 160096 GTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGC----ATGCGCT 160151 || | | |||| | | ||||| || |||||| |||| ||||||| || || Sbjct 503 GTTTTCGATCCAGCGGATCGCCCACTCGGCCTTC-TTGC---GCACGGCGGGGATCGTCT 448 Query 160152 CGACGGCGTTAAACAATCTGTCCT---GCTCCTTCACATCCTTGATCAGAGTAGCAATCA 160208 ||| |||||| || | | ||| || | | |||||||| || | |||| Sbjct 447 CGATGGCGTTGAAGAGCTGGGCCTTGCGCGCGGT---GTCCTTGATGTAGGTGTCGATCA 391 Query 160209 GCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATG 160268 || |||| | || | ||| | ||||||||||| || || ||| |||||| | Sbjct 390 GCAGACTGTACGTCTCGGAGTGGATGTTTTCGATGGCGATTTGGAAGCCGTAGAAGCAGC 331 Query 160269 TCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACC 160328 |||||| | |||||||| |||| | | || || | || || | | Sbjct 330 GCGCCTCGGGGATTTGCACCTCGGACATGAAGCGCGTGGCGAGGTTCTCGTTGACGATGC 271 Query 160329 CGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGA 160388 |||| | ||||||||||| || | ||||| | ||| || || | ||||| | ||||| Sbjct 270 CGTCCGACGCCGCAAAGAAGGCGAGCACGTTGGTGATAAAGTGGCGCTCGTTGTCGTTGA 211 Query 160389 GTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGG 160448 | | | ||||||| | | ||| || | || | ||| ||||| |||| | Sbjct 210 GCTTGGTGTCCCAGTCGGAGAGGTCGCCCGCGAGGTCGATCTCCTCCGCCGTCCAGAACG 151 Query 160449 CAGCCTGAGCAGTTTTGTACATGGCCCAGATGGCG 160483 |||| || | ||||||||| ||||||| || Sbjct 150 ACGCCTCGGCCTTCTTGTACATGCTCCAGATGTCG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795052555403120