Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq5011 82.4 9e-11 >seq5011 Length=2423 Score = 82.4 bits (90), Expect = 9e-11 Identities = 130/183 (71%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 40052 TCGCGGGATC--ATCGTTTCCGCCTGGAACCCTGTTGATCTT-GATGATATGGCTTTGCG 40108 |||||| || ||||||||||| ||||| || | | || | ||||| ||||| ||| Sbjct 638 TCGCGGCGTCTGATCGTTTCCGCATGGAATCCGGC-GCTCGTCGATGAAATGGCGCTGCC 580 Query 40109 TCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTA 40168 || || ||||| | ||||||||| ||| | |||| || || || ||| || Sbjct 579 GCCCTGCCACTGCCTGTTCCAGTTCTACGTGGCCGACGGAAAGCTTTCCTGCCAGCTCTA 520 Query 40169 TCAGCGTTCAGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCT 40228 ||||| || | ||| |||| | || |||||||||||||||| ||||| || || || Sbjct 519 CCAGCGCTCCGCCGATATCTTTCTCGGCGTGCCGTTCAATATCGCATCCTATGCCCTGCT 460 Query 40229 GAC 40231 ||| Sbjct 459 GAC 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565520588936160