Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq3870 116 5e-21 seq55 91.5 2e-13 seq1976 86.0 9e-12 >seq3870 Length=345 Score = 116 bits (128), Expect = 5e-21 Identities = 207/302 (69%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 124215 ACTTCTACCACTTTATCATAACTCAAGATGTCTGGATACATACGCTTGGCAGCGCACTCC 124274 |||| || || | ||| || ||| ||| || |||||||| |||||| ||||||||| Sbjct 328 ACTTTCACTACCTGATCGTAGTTCAGGATATCCGGATACATGCGCTTGCTTGCGCACTCC 269 Query 124275 AGTGCCATCTGTTTGATACGATACAGAGGATCAGTTGGTTTCAAGTTGTGTCCGTCTTTC 124334 || |||| ||||||||| || ||||| | ||| ||| | || || Sbjct 268 AGCGCCAGCTGTTTGATGTCGTAGTTCGGATCGCCTTTTTTATGGTTCAGACCATCGCGA 209 Query 124335 AGCGCGAAAACAAGTTTCGGGAAAACGGGAGTAATACCTTCTTTGCCAAGACCTTTCATC 124394 | ||| || || ||||||||||| || | ||| ||| | ||| || || ||| || Sbjct 208 ATCGCAAACACCAGTTTCGGGAACACCGCAGTTTTACGGTTTTTACCGAGGCCTGCGATA 149 Query 124395 CGAACTTTCAGAATTGCTTCCTGAATGAGTTCGGATTCCCAGCTAGTGCCTAGTCCAAAC 124454 || ||| || | ||||||||| || ||||||||||| ||||| || ||||| Sbjct 148 CGGTTACGCAGGATCGATTCCTGAATCAGGCGCGATTCCCAGCTGGTGCCCAGACCAAAA 89 Query 124455 CCGAAAGTGCAGAATGGAGTTTGACCATTTGCCGAGTGCAGAGTGTTTACCTCATACTCT 124514 || || || || || || ||||| || || | |||||| |||||||| || ||||| Sbjct 88 CCAAAGGTTACAAACGGCGTCTGACCGTTGGCGGTGTGCAGGGTGTTTACTTCGTACTCC 29 Query 124515 AG 124516 || Sbjct 28 AG 27 >seq55 Length=127961 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 191862 TGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCA 191921 ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct 112866 TGGTGGGCCGTGATGGATTCGAACCATCGACCAAAAGATTAAAAGTCTTCTGCTCTACCA 112807 Query 191922 ACTAAGCTAACGGCGCGTTG 191941 ||| |||||||||| | ||| Sbjct 112806 ACTGAGCTAACGGCCCATTG 112787 >seq1976 Length=21428 Score = 86.0 bits (94), Expect = 9e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 189963 TGGTGCGGATGGTCGGACTCGAACCGACACGCCTATGGCGCTAGAACCTAAATCTAGTGC 190022 |||||||||| | ||||||||||| |||| | | ||| ||||||||||||| |||| Sbjct 18931 TGGTGCGGATAGAGGGACTCGAACCCCCACGG-TCTCCCGCCAGAACCTAAATCTGGTGC 18989 Query 190023 GTCTGCCAATTTCGCCACATCCGC 190046 |||| |||||||||||| |||||| Sbjct 18990 GTCTACCAATTTCGCCATATCCGC 19013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720636562817760