Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_015457.1 Length=165919 Score E Sequences producing significant alignments: (Bits) Value seq3870 84.2 2e-11 >seq3870 Length=345 Score = 84.2 bits (92), Expect = 2e-11 Identities = 169/247 (68%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 41640 GATGTCAGGATACATTCTTTTGCTTGCGCATTCTAAAGCAAGCTGCTTAATATCATAGTT 41699 ||| || |||||||| | ||||||||||| || | || ||||| || || || ||||| Sbjct 302 GATATCCGGATACATGCGCTTGCTTGCGCACTCCAGCGCCAGCTGTTTGATGTCGTAGTT 243 Query 41700 CGGATCGTCTTTATAAAGATTAACACCTTCTTCAA-CGAACATAACAAGTTTAGGGAAAA 41758 ||||||| |||| | | | || | ||| || || || | | || ||||| ||||| | Sbjct 242 CGGATCGCCTTTTTTATGGTTCAGACCATCGCGAATCGCA-AACACCAGTTTCGGGAACA 184 Query 41759 TAGGAGTTATCCCGTCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAA 41818 | |||| | | || ||| || ||| ||||| || ||| || | || ||||| Sbjct 183 CCGCAGTTTTACGGTTTTTACCGAGGCCTGCGATACGGTTACGCAGGATCGATTCCTGAA 124 Query 41819 TCATTCG---TTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGCGTTT 41875 ||| || ||| |||| || ||| |||||| || |||||||| ||||| | Sbjct 123 TCAGGCGCGATTC---CCAGCTGGTGCCCAGACCAAAACCAAAGGTTACAAACGGCGTCT 67 Query 41876 GCCCGTT 41882 | ||||| Sbjct 66 GACCGTT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530744278702680