Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_015938.1 Length=89916 Score E Sequences producing significant alignments: (Bits) Value seq154 120 2e-22 >seq154 Length=55709 Score = 120 bits (132), Expect = 2e-22 Identities = 179/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 72917 GTCGCCTTCATCGCCCAACCCAGAGTGTCACGAGTGACATACTGATAGGTGAACGAGCCG 72976 |||||||||| |||||| || | ||||| || || | |||||| ||||| ||||||| Sbjct 9167 GTCGCCTTCAACGCCCAGCCAAAGGTGTCGCGCGTCAGATACTGGTAGGTATACGAGCCT 9226 Query 72977 ATACCCAGCACGACGTTGCTAGAGGCAAAGCCCTTAGCTTTCAGACGCTGGAAGATTTCC 73036 || ||||| || ||||||| || ||||| ||||| | ||| ||| | || ||| Sbjct 9227 ATGCCCAGGACAACGTTGCCGGATGCAAAACCCTTTTTCTCCAGCCGCACCAGAATGTCC 9286 Query 73037 AGTTGGCGAACCAGGGAGATTGAATCGCCGTAAATCAGGCCGATGTGGTCGTCAAGAACT 73096 | || ||| || ||| ||||||||||| |||||||||| ||| ||| || | Sbjct 9287 CGGCCCCGGGCCAAGGTGATGGAATCGCCGTAGATCAGGCCGACGTGCGAGTCCAGCAGC 9346 Query 73097 TTGTAGCCCTTGTTGTTGATATGACCACCAAAGGTGTCCCAGAGAACCTGAATAGCACCT 73156 |||||||| || | ||| || || ||||||||||| || || | || ||| Sbjct 9347 TTGTAGCCGCGGTCGGTGACGACGCCGCCGAAGGTGTCCCACAGGCATTGCACCGCGCCT 9406 Query 73157 TTAACTTCTGCTTC 73170 || ||||| | ||| Sbjct 9407 TTGACTTCGGGTTC 9420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 287570201768619