Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq164 91.5 5e-14 seq648 82.4 2e-11 >seq164 Length=17117 Score = 91.5 bits (100), Expect = 5e-14 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 46649 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCC 46708 ||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||| Sbjct 445 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCTCC 504 Query 46709 GGGCCTGC 46716 ||| ||| Sbjct 505 TGGCGTGC 512 >seq648 Length=65085 Score = 82.4 bits (90), Expect = 2e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 46649 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCC 46708 ||||||||||||| ||||| ||||||||||| ||| |||||||||||||| ||||||| Sbjct 2879 GTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATTCCCTCC 2938 Query 46709 GGGCCTGC 46716 | ||||| Sbjct 2939 TGACCTGC 2946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153689950209516