Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq152 141 4e-29 >seq152 Length=191884 Score = 141 bits (156), Expect = 4e-29 Identities = 225/320 (70%), Gaps = 12/320 (4%) Strand=Plus/Plus Query 52178 TGCAGGCGCTGGGCCGGCTGAAGCAGGGCGAGAAGAACAACACCGAACAGGCCTACGAGG 52237 ||| |||| |||| ||||| |||| ||| || ||||| ||||| ||||| || | | Sbjct 62088 TGCTGGCGTTGGGTCGGCTCAAGCCCGGCCAGCTCAACAAGACCGAGCAGGCGTATGCCG 62147 Query 52238 ACCATCTG---GAGTGGCGAAAGCACGTCGGGGAAATCCTCTGGTACAAGTTCGAGGGCG 52294 | | ||| || | || || |||||| | ||| | ||| || |||||||||| Sbjct 62148 ATCGGCTGCGCGAATTGC---AGGCGGTCGGGAAGATCGTGTGGCACCGGTTCGAGGGCC 62204 Query 52295 TGAAGCTCCGTCTGGCTGACAACACCTTCTACACCTGCGACTATTTCGTCATGCTCGCGA 52354 ||||| | || ||||| |||||||| ||||| || |||| ||||||| || Sbjct 62205 TGAAGTTGCGGCTGGCAGACAACACGTTCTATACGCCTGACTTCGCCGTCATGGCTGCCG 62264 Query 52355 ACGGCCAGCTGGAGGCCCACGAGGTGAAAGGCTTCTGGACCGACGATGCCCGCGTGAAAA 52414 | ||| ||||| ||| ||||| |||||| |||| |||||||| || | || | Sbjct 62265 ATGGCGTCATGGAGTGCCATGAGGTCAAAGGCCACTGGCAAGACGATGCACGGGCCAAGA 62324 Query 52415 TCAAGGTCGCGGCCGATCTCTATCCGTTCCGCTTCATCGCCGTGCAGAAGGTGAAG---A 52471 ||||||||||||||| | || ||||||||||||||||| || |||||| | | | Sbjct 62325 TCAAGGTCGCGGCCGCCATGTACCCGTTCCGCTTCATCGCGGT---GAAGGTCAGGGCCA 62381 Query 52472 AGGCGGACGGCGGCGGCTGG 52491 || ||||| || |||||| Sbjct 62382 AGCGAGACGGTGGTGGCTGG 62401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194139389160024