Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq19 181 1e-40 >seq19 Length=879724 Score = 181 bits (200), Expect = 1e-40 Identities = 538/825 (65%), Gaps = 16/825 (2%) Strand=Plus/Minus Query 36883 TTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATAT 36942 |||||||||| || || || ||| | || || ||||| || || |||| || || || Sbjct 584135 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 584076 Query 36943 TTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCA 37002 | |||||||||||||| ||||| | | || |||||| | || | | ||||| || Sbjct 584075 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 584016 Query 37003 GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTA 37062 | || || |||||||| || || || | |||| |||| || || || || | Sbjct 584015 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 583956 Query 37063 GTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTT---TAA 37119 | || || | |||||| || |||| ||||| ||| ||| || || ||| Sbjct 583955 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 583896 Query 37120 CTATATTAACAA-TAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACAT 37178 | || ||| | | || |||||| || ||| | |||| | | | || Sbjct 583895 TTCCATGAACGACTTCCTGGCTCAGTTT----ATTTTTGAGCATTTTATAAAGCAGGCAG 583840 Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||| |||||||| | || |||||||| ||||| |||||| |||||||| ||| Sbjct 583839 GCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCT 583780 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA-AAGAAAAT 37297 ||||| | ||||||||||| | ||| || || | || ||| ||| | |||||||| Sbjct 583779 GGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGAAGAAAAT 583721 Query 37298 ACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAAT 37357 ||||| ||||| || || || || | |||| | ||| || | | | || Sbjct 583720 GCCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA------AT 583667 Query 37358 CCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 ||| || ||| ||||| ||| || ||||| || || || | || | || Sbjct 583666 CCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAA 583607 Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477 || || |||||||||| |||| | ||||| ||||| || || | ||| |||| Sbjct 583606 CAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTC 583547 Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG 37537 |||||| || ||||| || ||||| || ||||||||||| | ||||| | | || Sbjct 583546 AGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTG 583487 Query 37538 AACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAA 37597 || ||| | | || || || | ||||||||| || || || ||||| || ||||| Sbjct 583486 TACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAA 583427 Query 37598 GAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATT 37657 |||||||| | || || ||||| | || | | ||| || | ||| | || Sbjct 583426 AAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTT 583367 Query 37658 AATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC 37702 || | || | |||| ||| ||| ||||||| |||||||| Sbjct 583366 CTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGC 583322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592240339305080