Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq5011 102 7e-17 seq250 100 2e-16 >seq5011 Length=2423 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 29824 TAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29883 |||| || || || ||||| ||||| || || || ||||| | || || ||||| || Sbjct 385 TAGAGATGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCTGCAGACCCGTGACCTGC 444 Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943 |||| |||| || || || | ||| ||||| || || || || ||||| || Sbjct 445 GCCACCATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACGGCACGCCGAGAAAGATA 504 Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30003 || | || | |||||||||||| || || |||| ||||||| |||||| ||||| || Sbjct 505 TCGGCGGAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGGCCACGTAGAACTGGAAC 564 Query 30004 ATGGTGTGGCACGGAGGAAGAGCCAT 30029 | | |||||| || || || ||||| Sbjct 565 AGGCAGTGGCAGGGCGGCAGCGCCAT 590 >seq250 Length=59172 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 29830 TGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29889 || ||||| |||||||| || || || || ||| | ||||||||| | || |||| | Sbjct 46341 TGCGCGTCGCCCAGGGTATGCACGAAGTCGCCCACGCCCAGCCCGGTGGCCTGCGCCACC 46400 Query 29890 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC 29949 |||| ||||| || | ||||||||||||||| || || || || || ||||| || Sbjct 46401 ATGTGGGTGAGCAGTGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGCCG 46460 Query 29950 GACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTG 30009 | |||||| | ||| || ||||| ||||| |||||| ||||| ||| | || Sbjct 46461 CTGCGCTGGTACAACTGGCAGCTGAGCTTGCCGTCCACCACGTAGAACTGGAACAGGTTG 46520 Query 30010 TGGCACGG 30017 ||||| || Sbjct 46521 TGGCAGGG 46528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408566171261171