Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq284 120 6e-23 seq1914 87.8 4e-13 >seq284 Length=207326 Score = 120 bits (132), Expect = 6e-23 Identities = 207/301 (69%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 25059 AAATCCATGGCGAAAGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGT 25118 ||| || |||| || ||||| || || || || | || | || ||||| |||||| | Sbjct 36388 AAAGCCCTGGCCAAGGAATTCAACTGCCCGGTGGTTGCCCTGTCGCAGCTCAACCGATCT 36329 Query 25119 CTTGAAAACAGACAGGATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATA 25178 ||||| | | | | | || ||||| || ||||| |||||||| || || || ||||| Sbjct 36328 CTTGAGCAGCGTCCGAACAAACGCCCGATCAACTCCGACTTGCGGGAATCCGGAGCGATC 36269 Query 25179 GAACAGGATGCTGATCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCCGACAGC 25238 || ||||||||||| | ||| || ||||||| ||||| |||||| |||| || | | Sbjct 36268 GAGCAGGATGCTGACGTGATCATGTTCGTATACCGGGACGAGGTGTATCACCCGGAGACC 36209 Query 25239 TCTGACAAAGGCATTGCCGAGATTATCATTGGCAAACACAGGAATGGCGAGCTAGGCACA 25298 | |||||||| || || || || || || ||||| | || || | ||||| Sbjct 36208 GAGCATAAAGGCATCGCTGAAATCATTATCGGTAAACAGCGTAACGGGCCAATCGGCACC 36149 Query 25299 GTGAGAGCGGCATTCATTGGGCAGTACACGCGATTTGAAAACCTATCACCAGAGAGCTAT 25358 | | ||| ||||| || | ||||| || || || ||||| | || | |||||| Sbjct 36148 ACGCGCCTGGCCTTCATCGGTAAATACACCCGCTTCGAGAACCTGGCGCCGGGCAGCTAT 36089 Query 25359 A 25359 | Sbjct 36088 A 36088 >seq1914 Length=11218 Score = 87.8 bits (96), Expect = 4e-13 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 25068 GCGAAAGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGTCTTGAAA-A 25126 |||||||| | ||||| || || | ||| | || ||||| ||||||| || || | Sbjct 4705 GCGAAAGAGATGAATTGCCCGGTGGTTGCGCTTTCCCAGCTCAACCGAGAACTGGAGCGA 4764 Query 25127 CAGACAGGATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATAGAACAGGA 25186 | | || ||||||| || || ||| ||||| |||| || || ||||| |||||||| Sbjct 4765 CGGCCAA-ATAAGCGTCCGATCAACGCAGACCTGCGTGATAGCGGTGCGATTGAACAGGA 4823 Query 25187 TGCTGATCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCCGACAGCTCTGACAA 25246 || || || || || | ||||| ||||| ||||| |||| | ||| |||| Sbjct 4824 CGCGGACCTGATTATGTTCGTCTACCGGGACGAGGTGTACCACCCTCAGAGCGAACACAA 4883 Query 25247 AGGCATTGCCGAGATTATCATTGGCAA 25273 ||||||||| || || || | ||||| Sbjct 4884 AGGCATTGCAGAAATCATTCTCGGCAA 4910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101517149107872