Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_018848.1 Length=37612 Score E Sequences producing significant alignments: (Bits) Value seq1940 100 7e-17 >seq1940 Length=14353 Score = 100 bits (110), Expect = 7e-17 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 30166 CTGATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTC 30225 || |||||||| || ||| |||||||| ||||| ||| || ||||||||||| || Sbjct 12940 CTCATGGCCGGCGAAACCGTCATCACCGTGGTGGGAAACCTCACGGCCGACCCCGAGCTG 12881 Query 30226 AGGTTCACCCCCGCCGGCGCCGCC-GTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCAC 30284 | | ||| | ||| || ||| || ||||||||| |||| ||||| || || | Sbjct 12880 CGCTACACGCAGAACGG-GCTGCCGGTGGCGAACTTCACCATCGCATCGACGCCTCGGAA 12822 Query 30285 GTTCGACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGT--CTCC 30342 |||||||| |||| || || ||| |||||||| | ||||||| ||||| ||| Sbjct 12821 CTTCGACCGTGCCGCGAATGAGTGGAAGGACGGCGATGCGCTGTTCC--TCCGTGCATCC 12764 Query 30343 GTATGGCGCCAGCAGGCCGAGAACGTCGCCGGATC 30377 || |||||| || |||||| |||| || || || Sbjct 12763 GTCTGGCGCGAGTTCGCCGAGCACGTGGCGGGTTC 12729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120222054985476