Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1288 165 2e-35 seq44 89.7 1e-12 >seq1288 Length=22276 Score = 165 bits (182), Expect = 2e-35 Identities = 387/572 (68%), Gaps = 19/572 (3%) Strand=Plus/Plus Query 25482 GGAG-ATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCA 25540 |||| |||||||||||||| | || |||||| || || ||||| || || || Sbjct 124 GGAGCATGTACAAGAAGGCCGAGGCGTCGTTCTGGACGGCGGAGGAGATCGACCTCGCGG 183 Query 25541 AGGACATGGACGGCTGGTACGCTCTATC-CAAAGAC---GAGCAGCATTTTCTCAAGTAC 25596 ||| | || |||| || | | | | ||| ||| |||| || ||| ||| || Sbjct 184 GCGACCTCTCCGACTGGGACAC-CAAGCTCAACGACAACGAGCGCCACTTTATCACCAAC 242 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 ||| | || |||||||| || || || || || || |||||||| || | | | ||| Sbjct 243 GTGCTCGCCTTCTTTGCGGCGTCGGACGGCATCGTCAACGAGAACCTCGCCACGCGCTTC 302 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716 | || ||||| | ||||| || |||||||| ||||| || ||||||||| Sbjct 303 ATGTCCGAGGTGCAAATCCCCGAGGCGCGCTGCTTCTACGGCTTCCAAATCGCCATCGAA 362 Query 25717 AATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGC- 25772 || | ||||| ||| ||| || || ||||| || ||||| | ||| ||| Sbjct 363 AACATCCACTCCGAGACGTA---CAGTCTGCTGATCGACACCTACATCAAGGACACCGCG 419 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 || || | | ||| || ||||||||| || ||| | | | |||||| Sbjct 420 CGCAAG-GCCCAGCTCTTCAACGCCATCGAGACGATCCCCGCCGTGCGCAAGAAGGCCGA 478 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||| || |||||| | | | | || | |||| |||||| || || || || Sbjct 479 GTGGGCGATCCGCTGGATCGAAAACTCGCGC---AGCTTTGCCGAGCGCCTCGTCGCGTT 535 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAGC 25951 ||| || || ||||||||||| ||| || ||||| ||| | ||||||||||||||| Sbjct 536 TGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCTGC-TCGATCTTCTGGCTCAAGA 594 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 || || ||||| ||| || ||| || |||||||| |||||| | |||||||| | Sbjct 595 AGCGCGGCCTCATGCACGGCCTCACCTTCTCGAACGAGCTGATCAGCCGCGACGAGGGCC 654 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 ||||| | || |||||||| ||||||||| || Sbjct 655 TCCACTGCGACTTTGCCTGTCTGCTCTACTCG 686 >seq44 Length=77107 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 221100 CCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACA 221159 |||||| || |||||||| || || ||| ||||| | ||| || | | ||| | Sbjct 10650 CCTTGAGCAGCTGCTTGTTGACGACAGTGAACTCTCCGGCGAGGACGCGACGACTGTAGA 10591 Query 221160 GGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGG 221219 ||| ||| ||||||||| ||||||||| || |||||||||| || ||||| Sbjct 10590 TGTTGCTGGTGTACGGTTCGAACGCCTCGTTGTTTCCGAGGATCTGAGAGGTCGAGGCGG 10531 Query 221220 TGGGCATGGGTGCCACCAGCAGACTGTTGCGCAGTCC 221256 | ||||||||||| |||| || ||||||||| || || Sbjct 10530 TAGGCATGGGTGCAACCATCAAACTGTTGCGGAGACC 10494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928724897746880