Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq613 109 3e-19 seq3536 84.2 1e-11 >seq613 Length=108671 Score = 109 bits (120), Expect = 3e-19 Identities = 151/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 17072 CTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAACCTGGTGGGTCTG 17131 ||||| ||| ||||| || || ||| ||||| || || || ||||||||||| ||| Sbjct 59751 CTGCCGCGCTCCGGCCTGGGCCACAAACACGGCATCGTCCTCGGCAACCTGGTGGGGCTG 59810 Query 17132 ATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCGCAGCGCTGAAC-C 17190 || || |||||||| ||||| ||| ||| ||| ||| |||||||| || | || | | Sbjct 59811 ATCGACTCGGACTACCAGGGCGAGTTGATGGTGTCCTGCTGGAACCGTGGC-CAGACCGC 59869 Query 17191 ATACACTGTCAGCCCT-GGTGAGCGTGTTGCCCAAATGGTTATCGTGCCAGTAGTGCAGG 17249 | || | || ||| | || ||||| |||||||| | || | || || || ||||||| Sbjct 59870 GTTCAATATC-GCCGTCGGCGAGCGCATTGCCCAACTCGTGCTGGTACCGGTGGTGCAGG 59928 Query 17250 CACAGTTTGAGCTGGTTGATGAATTC 17275 | || || |||||||| || || ||| Sbjct 59929 CGCACTTCGAGCTGGTCGAAGAGTTC 59954 >seq3536 Length=803 Score = 84.2 bits (92), Expect = 1e-11 Identities = 182/270 (67%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 17048 GACCCTGGTTATGCTGCTGTGCTGCTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATT 17107 ||||| ||||| || || || | ||||| ||||| ||| | || |||||| ||||| Sbjct 425 GACCCGGGTTACGCCGCGATGATCCTGCCGCGCAGCGGCATGGGACATAAACACGGCATC 484 Query 17108 GTACTTGGGAACCTGGTGGGTCTGATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCC 17167 || || |||||| |||| || ||||| || || || || ||||| | ||| ||| || Sbjct 485 GTCCTGGGGAACTTGGTAGGCCTGATCGACTCCGATTACCAGGGCCAATTGATGGTATCG 544 Query 17168 CTGTGGAACCGCAGCGCTGA-ACCATACACTGTCAGCCCTGGTGAGCGTGTTGCCCAAAT 17226 ||||| ||| || | || | || ||| ||| ||| || || | || ||| | Sbjct 545 ACATGGAATCGCGGC-CAGACAGAATTCACGCTCAACCCCATGGAACGCCTGGCGCAATT 603 Query 17227 GGTTATCGTGCCAGTAGTGCAGGCACAGTTTGAGCTGGTTGATGAATTCACTGCTTCAGA 17286 ||| ||||| || || |||| | || | | ||||||||||| | | || Sbjct 604 GGTCATCGTCCCGGTCCTGCAAGTCGGCTTCAATGTCGTTGATGAATTTGATACCAGCGA 663 Query 17287 ACGTGGAGACGGCGGATTTGGCCACACCGG 17316 ||| || | |||||| || ||| |||||| Sbjct 664 ACGCGGTGTCGGCGGCTTCGGCAGCACCGG 693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238785942543610