Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq329 104 1e-17 >seq329 Length=161735 Score = 104 bits (114), Expect = 1e-17 Identities = 178/258 (69%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 78363 ATATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGT 78422 ||||| || || |||| || || || || | || || || || ||||| |||||| Sbjct 13727 ATATGGTTATTATAAAGGTGGGCATCGCCAAGGGTATGGATAAAATCTCCCGACTCCAGT 13668 Query 78423 CCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATT 78482 ||||| | || |||| || || ||||| || || || ||||||||||| || | Sbjct 13667 CCGCAAACCTGTGCAACCATCATAGTCAGTAAGGCATAGGAGGCAATGTTAAAAGGTACC 13608 Query 78483 CCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGAT 78542 || | || | || | ||||| || || | || || || || ||||| ||| | | Sbjct 13607 CCCAGAAAAATATCTGCACTTCGCTGATAAAGCTGACAGCTCAGTTTTCCGTCA---GCT 13551 Query 78543 ACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGGA 78602 || ||||||||||| | | || || || || |||||||||| |||| || || | Sbjct 13550 ACATAAAACTGGAAAAAGGCATGGCAGGGTGGAAGTGCCATATGTTCTATCTCTGCCACA 13491 Query 78603 TTCCAAGCAGACACAATA 78620 ||||| |||||||||||| Sbjct 13490 TTCCAGGCAGACACAATA 13473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300122221768600