Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq3870 98.7 7e-16 >seq3870 Length=345 Score = 98.7 bits (108), Expect = 7e-16 Identities = 206/307 (67%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 27667 CGATGCTTGTCAGACTCTAGAATACCAAGTAAATACTATTTACTCAACTAATGGTCAGAC 27726 |||||| | ||| | || || ||| ||||||| || | || | | || |||||||| Sbjct 11 CGATGCCTTCCAGTCGCTGGAGTACGAAGTAAACACCCTGCACACCGCCAACGGTCAGAC 70 Query 27727 TCCGTTCTTGACATTTGGATTCGGTCTAGGTACTTCTTGGGAAGCTAAACTAGTTCAGAA 27786 ||||| | || ||||| || ||||| || || |||||| | || ||||| | Sbjct 71 GCCGTTTGTAACCTTTGGTTTTGGTCTGGGCACCAGCTGGGAATCGCGCCTGATTCAGGA 130 Query 27787 AGGTATTCTACAGAATCGTATTGCTGGTCTAGGTAAAGAAGGTACTACTCCGGTATTCCC 27846 | || || | || ||||| || || || |||||| | ||| ||| |||| ||||| Sbjct 131 ATCGATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGTTCCC 190 Query 27847 TAAGCTAGTATTTGGTCTCAAAGATGGGGTAAACCTGAAGCCAGAAGACCCTAACTACGA 27906 || || || |||| | ||||| | |||| || || || || |||||||| Sbjct 191 GAAACTGGTGTTTGCGATTCGCGATGGTCTGAACCATAAAAAAGGCGATCCGAACTACGA 250 Query 27907 TATTAAGCAGCTTGCATTAGAATGTGCTACTGTTCGCATGTATCCAGACATACTTAACTA 27966 || || ||||| || | || || || | ||||||||||| || || || ||||| Sbjct 251 CATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATATCCTGAACTA 310 Query 27967 CGATAAG 27973 |||| || Sbjct 311 CGATCAG 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356649506331349