Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq154 107 2e-18 >seq154 Length=55709 Score = 107 bits (118), Expect = 2e-18 Identities = 374/576 (65%), Gaps = 21/576 (4%) Strand=Plus/Minus Query 44073 GCCCTGCATGACCTCGGCTACCTGCCTATCGAAGTCCGCGCGCTGCCTGAAGGCACCATG 44132 |||||| | ||||| ||||||||||| | ||| ||||| ||||||| |||||| || | Sbjct 10242 GCCCTGTACGACCTGGGCTACCTGCCCCTGGAAATCCGCTCGCTGCCCGAAGGCGCCC-G 10184 Query 44133 TGCCCGTATG-GCGTTCCGGTGTATGTGATGTTC---AACACCCTGCCGGAGTTCTACTG 44188 | | || |||| || | || | ||| ||||| | ||||| ||| || Sbjct 10183 CGTCGACATCCGCGTGCCCCCG---GTCACCTTCGTCAACACTCGCCCGGAATTCGCGTG 10127 Query 44189 GCTGACCAACTATCTGGAGACTGTGTTCAGCTCTGAGATCTGGAAGCCGATGACGAACGC 44248 |||| | ||| | || || ||||||||| || ||||||| | || ||| Sbjct 10126 GCTGGTGACCTACATCGAAACCCTGTTCAGCTGCGAATCCTGGAAGGCCTCCACCGTCGC 10067 Query 44249 CACCATCGCCCTGCATTACAAGGCA--CTGATGGTGAAAGCTGCCCTCGCCACAGGCGTG 44306 |||||||||| | | ||| ||| || | | ||||| | || ||| Sbjct 10066 CACCATCGCCTTTGAATACC--GCAAGCTTCTTACCTACTTTGCCCGCCTGACCGGCAGC 10009 Query 44307 TCGCCGGACCATTGGTTCATCGACTACCAAGGCCACGACTTCTCCTTCCGTGGCATGAGT 44366 || |||| ||| || ||| ||||||||||||||||| | || |||||| Sbjct 10008 CCGATGGAC------TTCGTCAACTGGCAAGGCCACGACTTCTCGATGCGCGGCATGTCC 9955 Query 44367 GGATGGCACGATGCTGCGTCTTCCGGTTCCGGTCATCTGGTGTTCTTCAAAGGCACTGAT 44426 || | |||| || ||| | ||||| || ||| |||| ||||| || Sbjct 9954 GGCCTGTACGACGCCCGCAAGAGCGGCGCGGGTCACTTGCTGTCGTTCACCGGCACCGAC 9895 Query 44427 ACCAACCCTGCCCTGGACTTCGTAGAAGAGTATTATGGCGCAGACATCGACGAAGACTAT 44486 |||| ||| ||| | || | | | ||||| || ||||| || || ||| | | Sbjct 9894 ACCATCCCGGCCATTGATTACCTGGAAGACCTGTACGGCGCGGAT-TC--CGATCGCGAA 9838 Query 44487 GTCGTTGCTGGTTCTGTTGCGGCTACCGAACACGCCGTGATGTGTATGGGTACGAAGGAT 44546 | | | || |||||| | || ||||||||| | || ||||| |||| | ||||| Sbjct 9837 CTGATCGGAGGCTCTGTTCCCGCCACCGAACACTCGGTCATGTGCCTGGGCAGCAAGGAA 9778 Query 44547 GGCGAATTCGAAACCTTCCGCCGCCTGGTGCAGGACGTGTATCCTGATGGCATCGTCAGC 44606 |||||| |||||||| ||||||||||||| | || ||||| | |||||||| Sbjct 9777 GGCGAAATCGAAACCATCCGCCGCCTGGTCACCCAGGTCTATCCGGCCGGCATCGTGTCG 9718 Query 44607 ATCGTGTCTGATGCGTGGGATTACTGGCAGGTCATC 44642 | ||||| ||| | ||||| | |||||| ||| || Sbjct 9717 GTGGTGTCCGATACCTGGGACTTCTGGCAAGTCGTC 9682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510602879041280