Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_020081.2 Length=149844 Score E Sequences producing significant alignments: (Bits) Value seq8774 86.0 6e-12 seq33 82.4 7e-11 >seq8774 Length=609 Score = 86.0 bits (94), Expect = 6e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 122068 TCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACTGAGCTACCAGTCCAA 122127 ||||||| |||||||| ||||||||| || |||||||||||||||||||||||| |||| Sbjct 512 TCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGGCCAA 453 Query 122128 GG 122129 || Sbjct 452 GG 451 >seq33 Length=92283 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 122068 TCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACTGAGCTACCAGTCCAA 122127 ||||||| |||||||| ||||||||| || |||||||||||||||||||||||| |||| Sbjct 63226 TCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGGCCAA 63285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479310918963680