Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq172 152 1e-32 >seq172 Length=24343 Score = 152 bits (168), Expect = 1e-32 Identities = 220/309 (71%), Gaps = 11/309 (4%) Strand=Plus/Plus Query 34834 GCGGGCGTCCAGCATCTTCATCTGATCGCAGGCGATGTCGGTGGTGTAGTGCGTCACGCC 34893 |||| || ||||||||| ||| | ||| | ||||||||||| ||| | | |||||| Sbjct 1259 GCGGCCGCCCAGCATCTGCATTTCGTCGGCGATGATGTCGGTGGAGTACTTCTCCACGCC 1318 Query 34894 TTCCTTTTCG---TACTTGCCGTAACGGATCATGCCCGCCACCGCGATCTTCGAACCCTT 34950 |||| || |||||| ||||||| | |||| | || || | ||||| Sbjct 1319 GTCCTGGCCGGTGTACTTGTCGTAACGCAGGCTGCCTTCGACGTAGACCGAGCTGCCCTT 1378 Query 34951 GCGCAAGTATTCGCCGGCAATCTCGGCCAGCTTCCCGAAGAACACCACCCGGTGCCACTG 35010 ||||| |||||||||||| || || | ||||| |||||||||||||| |||||||| | Sbjct 1379 GCGCAGGTATTCGCCGGCGATTTCACCGAGCTTGCCGAAGAACACCACGCGGTGCCATTC 1438 Query 35011 GGTTTCTTCGACCTGGTTGCCCTCGCGGTCTTTCCGCTTCGAC----GTGGTGGCGATGG 35066 ||| || ||||||||| || ||| || || ||| |||||||| | | Sbjct 1439 GGTACGCTCCTGCTGGTTGCCATCCTTGTCCTTGCG----GACGCTGGTGGTGGCCAGGC 1494 Query 35067 AAATGCGGGTGATGGCCATGCCGCCCTGCGTGTAAGTCACCTTCGGGTCATCCCCCAGGT 35126 ||||||||||| ||||||||||| || ||||| |||| | |||||| | || |||| Sbjct 1495 TGATGCGGGTGATCGCCATGCCGCCTTGGGTGTACTTCACGTCCGGGTCGTTGCCGAGGT 1554 Query 35127 TCCCGATCA 35135 | |||| || Sbjct 1555 TGCCGACCA 1563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137343155113950