Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_020856.2 Length=40931 Score E Sequences producing significant alignments: (Bits) Value seq2511 118 3e-22 >seq2511 Length=13392 Score = 118 bits (130), Expect = 3e-22 Identities = 468/724 (65%), Gaps = 32/724 (4%) Strand=Plus/Plus Query 36874 CAAGATCGTTTCGCTGAACTGGCGAGACAACCCGAAGTTTCCCGACGTGCTGGAGGCTGA 36933 |||||||||| ||| || ||||| || ||||| ||||| || | | | ||||| ||| Sbjct 1795 CAAGATCGTTCAGCTCAATTGGCGCGATAACCCTAAGTTCCCGGCCAAGTTGGAGCGTGA 1854 Query 36934 GCGCCTGAACGA--CTTCAC-GCGCCGGTCC-GACCATTATGAACACATCTGGGAAGGCG 36989 | | | ||||| ||| | || |||| ||||| || | || || |||||||| | Sbjct 1855 GAGGC--AACGAGACTTGGTAGAGC--GTCCAGACCAATACGGGCATATTTGGGAAGGTG 1910 Query 36990 GGTTCGTAACCGTTGTCGAGGGCGCATA--TTACGCCAAGGCAATCACGGTAGCGCGGTC 37047 | | || |||| ||||| || | || || ||| | || || | | Sbjct 1911 AACATGCCAATGTGATCGAAGGCGCCTACCTGGCGTCA--GCATTGACCAAGGCAAAGGC 1968 Query 37048 TGAGAACAGAATAGGCCACGTCGCTGCCGATCCTTTGATGACCATTCGTGCGGTCTGGGA 37107 ||| ||||| |||| ||||| || || || |||||||||| || | || || Sbjct 1969 GGAGGGAAGAATCGGCCGAGTCGCAGCTGACCCGCTGATGACCATCCGCTTGTTCGCAGA 2028 Query 37108 CATTGGCGGCACGGGGCAGAAGTCAGACGCAACC--GCAATCTGG--ATTGTCCAGTACG 37163 |||||||||||| || |||| |||| ||| | ||||| || | |||| Sbjct 2029 CATTGGCGGCACCGGTGCGAAGGCAGAT--AACTTTGTCTTCTGGGCATCG--CAGTTTA 2084 Query 37164 TCGGACGCGAAATTCGCCTGCTGAACTACTACGAGGCGCAGGGGCAACCTCTGGCGGCGC 37223 | | || || ||||| |||||||| | |||||| ||| || || || | | ||||| Sbjct 2085 TTGCCCGGGAGATTCGGGTGCTGAACCATTACGAGCAGCAAGGCCAGCCAATCGAGGCGC 2144 Query 37224 ATATCGAGTGGCTGCGGGCAAACGGATACGGGGCGG------CGC---TCTGCGTATTGC 37274 || || | |||||||| || | || ||| | | ||| |||| | | Sbjct 2145 ATCTCAACTGGCTGCGATCACAAGGTTACACCCCAGATAGAGCGCAAATCTGGCTC---C 2201 Query 37275 CCCACGATGGCAGCACTAACGACAAGGTGCATGACGTATCATTCGAGAGCGCACTACGGG 37334 | ||||| || || | ||||||||||||||||| || | | || | || Sbjct 2202 CGCACGACGGAGATACACAAGACAAGGTGCATGACGTTTCCTACCGCTCAGCGTTTGAGG 2261 Query 37335 CCGCAGGGTTCGAAGTGCAGGTCGTTAAGAACCAAGGGGCGGGTGCGGCAATGCAGCGCG 37394 | || |||| | || ||| | ||| ||||| ||| || |||||| ||| | Sbjct 2262 CGGCGGGGTACATCGTCACGGTTATCCCGAATCAAGGTAAGGGCGCAGCAATGTTGCGAG 2321 Query 37395 TAGAGGCGGCACGGCGTCTATTCCCCAGCATGTGGTTCAACCAAGCGACGACAGAGGCCG 37454 |||| || | || || || ||||| |||||||||||||||| ||| ||| || | | Sbjct 2322 TAGAAGCATCTCGCCGGCTGTTCCCTTCGATGTGGTTCAACCAAGAGACAACACAGCCAG 2381 Query 37455 GCTTGGACGCGATCGGCTGGTATCACGAAAAGCGCGACGAAGAACGCGGCATCGGCTTAG 37514 | | ||||| | |||||||| ||||| |||||||| | | || ||| ||| | | Sbjct 2382 GTATCGACGCATTGGGCTGGTACCACGAGAAGCGCGATGCCGTGCGAAACATTGGCCTTG 2441 Query 37515 GGCCAAGCCATGACTGGTCAAGTCACGGCGCTGACGCCTTCGGGCTGGTGGCTGTTGCCT 37574 | ||| ||||| ||| | ||| || | || || ||||| ||| |||| || || | Sbjct 2442 GCCCAGAGCATGATTGGGCGTCGCACAGCTCAGATGCATTCGGTCTGATGGCAGTGGCTT 2501 Query 37575 ATGA 37578 | || Sbjct 2502 ACGA 2505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130841552523582