Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_020858.2 Length=40929 Score E Sequences producing significant alignments: (Bits) Value seq2511 118 3e-22 >seq2511 Length=13392 Score = 118 bits (130), Expect = 3e-22 Identities = 468/724 (65%), Gaps = 32/724 (4%) Strand=Plus/Minus Query 9789 TCATAGGCAACAGCCACCAGCCCGAAGGCGTCAGCGCCGTGACTTGACCAGTCATGGCTT 9848 || || || || |||| ||| ||||| || || | || ||| | ||| ||||| | Sbjct 2505 TCGTAAGCCACTGCCATCAGACCGAATGCATCTGAGCTGTGCGACGCCCAATCATGCTCT 2446 Query 9849 GGCCCTAAGCCGATGCCGCGTTCTTCGTCGCGCTTTTCGTGATACCAGCCGATCGCGTCC 9908 || || | ||| ||| || | | |||||||| ||||| |||||||| | ||||| Sbjct 2445 GGGCCAAGGCCAATGTTTCGCACGGCATCGCGCTTCTCGTGGTACCAGCCCAATGCGTCG 2386 Query 9909 AAGCCGGCCTCTGTCGTCGCTTGGTTGAACCACATGCTGGGGAATAGACGCCGTGCCGCC 9968 | || | || ||| ||| |||||||||||||||| ||||| || || || | || Sbjct 2385 ATACCTGGCTGTGTTGTCTCTTGGTTGAACCACATCGAAGGGAACAGCCGGCGAGATGCT 2326 Query 9969 TCTACGCGCTGCATTGCCGCACCCGCCCCTTGGTTCTTAACGACCTGCACTTCGAACCCT 10028 ||||| ||| |||||| || ||| ||||| ||| | ||| || | |||| Sbjct 2325 TCTACTCGCAACATTGCTGCGCCCTTACCTTGATTCGGGATAACCGTGACGATGTACCCC 2266 Query 10029 GCGGCCCGTAGTGCGCTCTCGAATGATACGTCATGCACCTTGTCGTTAGTGCTGCCATCG 10088 || ||| | || | | || ||||||||||||||||| | || || ||| Sbjct 2265 GCCGCCTCAAACGCTGAGCGGTAGGAAACGTCATGCACCTTGTCTTGTGTATCTCCGTCG 2206 Query 10089 TGGGGCAATACGCAGA---GCG------CCGCCCCGTATCCGTTTGCCCGCAGCCACTCG 10139 || || | |||| ||| | | ||| || | || |||||||| | | Sbjct 2205 TGCGG---GAGCCAGATTTGCGCTCTATCTGGGGTGTAACCTTGTGATCGCAGCCAGTTG 2149 Query 10140 ATATGCGCCGCCAGAGGTTGCCCCTGCGCCTCGTAGTAGTTCAGCAGGCGAATTTCGCGT 10199 | ||||||| | | || || || ||| |||||| | |||||||| ||||| || || Sbjct 2148 AGATGCGCCTCGATTGGCTGGCCTTGCTGCTCGTAATGGTTCAGCACCCGAATCTCCCGG 2089 Query 10200 CCGACGTACTGGACAAT--CCAGATTGC--GGTTGCGTCTGACTTCTGCCCCGTGCCGCC 10255 | | |||| | || ||||| | ||| |||| |||| || |||||||| Sbjct 2088 GCAATAAACTG--CGATGCCCAGAAGACAAAGTT--ATCTGCCTTCGCACCGGTGCCGCC 2033 Query 10256 AATGTCCCAGACCGCACGAATGGTCATCAAAGGATCGGCAGCGACGTGGCCTATTCTGTT 10315 |||||| || | || |||||||||| || || || ||||| |||| ||||| Sbjct 2032 AATGTCTGCGAACAAGCGGATGGTCATCAGCGGGTCAGCTGCGACTCGGCCGATTCTTCC 1973 Query 10316 CTCAGACCGCGCTACCGTGATTGCCTTGGCGTAA--TATGCGCCCTCGACAACGGTTACG 10373 ||| | | || || | ||| || || | || ||||| |||| || | | Sbjct 1972 CTCCGCCTTTGCCTTGGTCAATGC--TGACGCCAGGTAGGCGCCTTCGATCACATTGGCA 1915 Query 10374 AACCCGCCTTCCCAGATGTGTTCATAATGGTC-GGACCGGCGC-GTGAAG--TCGTTCAG 10429 | |||||||| || || | || ||||| |||| || | ||| ||||| | Sbjct 1914 TGTTCACCTTCCCAAATATGCCCGTATTGGTCTGGAC--GCTCTACCAAGTCTCGTT--G 1859 Query 10430 GCGCTCAGCCTCCAGCACGTCGGGAAACTTCGGGTTGTCTCGCCAGTTCAGCGAAACGAT 10489 | |||| ||||| | | | || ||||| ||||| || ||||| || ||| |||||| Sbjct 1858 CCTCTCACGCTCCAACTTGGCCGGGAACTTAGGGTTATCGCGCCAATTGAGCTGAACGAT 1799 Query 10490 CTTG 10493 |||| Sbjct 1798 CTTG 1795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130835153308434