Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_021307.1 Length=49894 Score E Sequences producing significant alignments: (Bits) Value seq2859 87.8 6e-13 seq164 82.4 2e-11 >seq2859 Length=8594 Score = 87.8 bits (96), Expect = 6e-13 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 1688 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAGTCCTG 1745 ||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct 3498 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 3555 >seq164 Length=17117 Score = 82.4 bits (90), Expect = 2e-11 Identities = 68/82 (83%), Gaps = 6/82 (7%) Strand=Plus/Plus Query 1688 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAG----TCC 1743 ||||||||||||| |||||||||||||||||| |||| ||||| |||||||| ||| Sbjct 445 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCTCC 504 Query 1744 TGCCGTG--TCTGCTCCCTTCC 1763 || |||| || ||||||||| Sbjct 505 TGGCGTGCCACTTCTCCCTTCC 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159519635209344