Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq3870 138 2e-27 >seq3870 Length=345 Score = 138 bits (152), Expect = 2e-27 Identities = 222/318 (70%), Gaps = 1/318 (0%) Strand=Plus/Plus Query 172427 ACGACGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACGGTCAGA 172486 |||| || || || || | ||||| |||| ||||| |||| || | |||||||||| Sbjct 10 ACGATGCCTTCCAGTCGCTGGAGTACGAAGTAAACACCCTGCACACCGCCAACGGTCAGA 69 Query 172487 CGCCATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTATTCAGA 172546 |||| || || || || ||||| || || |||||| || |||||| Sbjct 70 CGCCGTTTGTAACCTTTGGTTTTGGTCTGGGCACCAGCTGGGAATCGCGCCTGATTCAGG 129 Query 172547 AATGCATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGATTTTCC 172606 ||| || |||| || || || || || || || || | ||||| ||| | |||| Sbjct 130 AATCGATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGTTCC 189 Query 172607 CGAAACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGTGTTACG 172666 ||||||| || || | || |||||| ||||| ||| ||||||||||| |||| Sbjct 190 CGAAACTGGTGTTTGCGATTCGCGATGGTCTGAACCATAAAAAAGGCGATCCGAACTACG 249 Query 172667 GCATTAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTGAGCT 172726 ||| || |||| || || || |||||||| |||||||||||||| |||||| ||| || Sbjct 250 ACATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATATCCTGAACT 309 Query 172727 ATGAAAAGCTAGTAGAAA 172744 | || || |||| |||| Sbjct 310 ACGATCAGGTAGT-GAAA 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791804974679320