Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq98 336 4e-88 seq353 143 5e-30 >seq98 Length=166217 Score = 336 bits (372), Expect = 4e-88 Identities = 912/1370 (67%), Gaps = 27/1370 (2%) Strand=Plus/Minus Query 1476 CCGGGTAGAATGAGCGCACCAACTGGAATACGCCGAGACCGAGGCCGGTCGCGTCAATGC 1535 ||||| |||| ||| |||| |||| || ||| || | |||||| ||||| || | Sbjct 136751 CCGGGAAGAACTGGCGGACCAGCTGGGCCACACCGGTGCCCATGCCGGTGGCGTCGATCC 136692 Query 1536 CGATGTATTCGACGTTGTATTTCTCAGTGAGCCTGCGGATGCCTTCTGCCTGCGCGGCAA 1595 ||||||| ||| ||| || |||| | | |||| | ||||| | || | Sbjct 136691 CGATGTAGGTGACCCAGTAGCGCTGGGTGACCTTCTGGATAAACGCCGCCTGGTCAGCGA 136632 Query 1596 AGTCCATGCCTTTCCACTGGTGACGCTCCAGCATGCGAAACTTGCCACCCGAAACCACCG 1655 |||||||||| || |||||||||||||||||| ||| ||||||||||| | || | Sbjct 136631 AGTCCATGCCCTTGAACTGGTGACGCTCCAGCACGCGGAACTTGCCACCGGGCACTTGGG 136572 Query 1656 GCGGCGCGAGTACGACACATCCGGCACTGTCGCCAGTGTGGGACGGGTCGTAGCCAATCC 1715 ||||||| | | || ||||| |||||||| || | || ||||||||| ||||||| Sbjct 136571 GCGGCGCCACAATCACGATGCCGGCGCTGTCGCCCGTCTCGGCCGGGTCGTACCCAATCC 136512 Query 1716 AGACCGGGCGCGAGCCGAACGGGTGGTCGGCGAACGGGGCGAA---GTCCTCCCA-TGTT 1771 | |||| ||| ||| | ||| | |||||| ||| ||| | | |||| | Sbjct 136511 ACACCGCGCGGTCGCCATATGGGCGCATGGCGAAGGGGCTGAACTCGCCGGCCCACTCCA 136452 Query 1772 TCCATCACGTCGACCATGCAGCGCTGCAGC-TCCTCGAACGGGAATACCGATGCCTTATC 1830 ||| | ||| ||| ||| |||||||| || || | |||||| || || | || Sbjct 136451 CCCAGC-TGTCCACCTGGCACGGCTGCAGCATCGTC-AGCGGGAACACGCTGGCGCTGTC 136394 Query 1831 GTCGACAAACTCGCACATAAACAGGTTCTTAAAGTCCTCATCACTGTTTTCGCGTCTGAG 1890 ||| || ||||||||||| | |||||| || ||||| | |||| ||||| | || Sbjct 136393 GTCCACGAACTCGCACATCAGCAGGTTGGCGAATTCCTCGGCGCTGTAATCGCGCCGCAG 136334 Query 1891 CTGGTCGAGGTCGAACAGGGTGCAGCCACCGGCAAGGGCGTCCTCAATAGTGACAATCTG 1950 || | | | |||||||| ||| || | | | ||||| | ||||| ||||| Sbjct 136333 CTCGGCCACATCGAACAGATCGCACCCTCGGTCGGCCGCGTCGAGCACTGTGACGATCTG 136274 Query 1951 CCGCCACTGTCCGTCAGCGCAAAGAAGCCCACCGGCGAGCGCGCTGTGACTGATGTCGAT 2010 |||||| |||| |||| | | |||| | | ||| || ||| |||| |||| Sbjct 136273 CCGCCAGATAGCGTCCTCGCAGCGTCGGCCACTGCCCAGCCGGCCGTGGCTGACATCGA- 136215 Query 2011 TTCGAT-GCGGTCAGCAGCACTGGCGCGCCCCTTGTTGAACAGCTCGCCAGACCAGAAGG 2069 ||||| | | | || | ||| | ||||||||||| ||||||| | |||||| Sbjct 136214 -TCGATACCTGCTGGGAGGTC-GGCTTG-CCCTTGTTGAAGCGCTCGCCTGTCCAGAAAT 136158 Query 2070 GATAAGCGCCGTGCGCCAGCGTGGAAGGTGTCGAAAAGTAAGTTGAGCGCAGATGCTTCT 2129 || || ||||||||| |||||||| || ||||| || |||| | ||| | Sbjct 136157 CGTAGGCTTCGTGCGCCATGGTGGAAGGCGTGCTGAAGTAGGTCTTGCGCCATTTCTTGT 136098 Query 2130 GCGAGGCCATGCCCGATGCGACTTTGCGCAGCTTCTGAAAATTCGGGATCCAGAATATTT 2189 || |||||||| ||||| ||| ||||| | || | ||||||| | || Sbjct 136097 GCATCGCCATGCCGCTGGCGACCTTGTTCAGCTGGTTGAAGCCGTAGGTCCAGAAGAATT 136038 Query 2190 CATCGACATACAGGTCGCCGTTATGGCTTTGTGCGGTGTTGGAATTGGTGCCGAGAAAAA 2249 | |||| || | | |||| | || || |||||| | |||||||| ||||| | Sbjct 136037 CGTCGAAGTAGAAATTCCCGTGGTAGCCCTGCGCGGTGCGTGCGTTGGTGCCCAGAAAGA 135978 Query 2250 TCAGCTTTGCGCCGTTGTTGCCGATAACAATCGGGTCGCCGGTCAGGTCGACGTCAACCA 2309 ||||| ||||||||| ||| | || || || |||||||| ||||| ||| | || Sbjct 135977 ACAGCTCAGCGCCGTTG--GCC-AGGACGATGGGATCGCCGGTGAGGTCCCGGTCCAGCA 135921 Query 2310 -GTCGCGCA--AACTGGATGATGTATTCCCGGAACACGTAAGCCTGCGTTTTACTGGCCG 2366 ||||||| || ||||| || |||| | || ||||| | || || Sbjct 135920 CCTCGCGCACGAAGCCACGCATGTAGCCCAGGAAGATGTGCGCCTGACTCTTGGATGCGC 135861 Query 2367 ACAGAAAAATCTGGTTATGGCCGGTCTTGAGCGCGCGCAGCAGTGCCTCGCGGGAAAAGT 2426 ||| || ||||| || ||||| | | |||||| | ||| |||||||||| ||||| Sbjct 135860 TCAGGAAGATCTGATTGCGGCCGCTGATCAGCGCGTCGATCAGCGCCTCGCGGGCAAAGT 135801 Query 2427 AGAACGTCGCGCCAATCTGGCGGGATTTGAGAATATCGCGAATACGGTGCGCCAGTCCTG 2486 || | || ||||| ||||| || || ||||| || |||| | || | ||| || | Sbjct 135800 AGTAGGTGGCGCCGATCTGCCGCGACTTGAGGATCACGCGCGTCCGCT-CGC--TGCCGG 135744 Query 2487 CCCGGTACCACTGCAACTGGTATTCGAAAGACTGGTCGAAGAAAATTTCTTCCAGCTTTG 2546 | |||||||| | |||||| ||||| || ||||| ||| | |||| | Sbjct 135743 CGCGGTACCAATCGCGCTGGTAATCGAAGCACCCGTCGAGGAACGCCTGGCGCAGCCGTT 135684 Query 2547 CGACAGCCTCATCGCTGAAAAAGTTCTTTTTCGGCCTCTTACGCTCCCCTTTGTTACGGT 2606 | || |||| |||||||| |||||| | | |||| | || ||| |||| Sbjct 135683 CCACTTCCTCTTCGCTGAACTCGTTCTTGCGGGCCTTCTTCTTCGGGCCAGCGTTGCGGT 135624 Query 2607 TGGCAACGTTGGGGTTAAGGTCGGCCTCGTTGCCGGTCTGGCT-GTAGCGGTTGACGCGC 2665 |||| || ||||| ||||| ||||||||||| | | || ||| || | || ||| Sbjct 135623 TGGCGACCGCTGGGTTCAGGTCCGCCTCGTTGCC-GCCGCCCTGGTAACGCTGGATGCGG 135565 Query 2666 GCCAGTCGCTCAATCTGCCGCCCGAGCAGGTCAATCTCTTTGAAGTCGCCGCCTGACTTT 2725 ||| | ||||| | |||||| |||||||| |||||||||||||||||||| | ||| Sbjct 135564 GCCTGCCGCTCCAGCTGCCGATGCAGCAGGTCGATCTCTTTGAAGTCGCCGCCGGTCTTA 135505 Query 2726 TGCGGCTTGGCGATGAGCTGAATCAGGCGCGCCT-CAAGGCTGCTTTCGACACGGGAAAT 2784 |||| ||| || || ||||||| |||||| || | ||||| | Sbjct 135504 CCTTCCTTGTGGATCAGGATGGCCAACCGCGCCTCCAAGGC-GCCGCCAACACGCTCCA- 135447 Query 2785 CGGT-GCGATGCCGTCCCAGCCGTCGCGCTGTTTCCAGCTTTGCACGGTC 2833 |||| || || |||||| |||||||| |||||||| || |||||| Sbjct 135446 CGGTATCGGCGCGGTCCCATTCGTCGCGCGCCTTCCAGCTGTGGACGGTC 135397 Score = 197 bits (218), Expect = 3e-46 Identities = 889/1381 (64%), Gaps = 67/1381 (5%) Strand=Plus/Minus Query 14029 CACCCCTTAACCAC-GGAGTTAACCGGATGAGTGATTTTCACCACGGCACGCAGGTCATC 14087 |||||| ||||| | ||||| | | | | || | |||||||||| | |||||| Sbjct 123847 CACCCCATAACCGCAGGAGTCACCATGGCCACCGACTATCACCACGGCGTACGTGTCATC 123788 Query 14088 GAAATTAATGACGGTACGCGTGTTATTTCCACAGTAGCGACTGCAGTCGTTGGCATGGTC 14147 || || || | |||| || || || | || || || ||| | ||||| || Sbjct 123787 GAGATCAACGGCGGTGTCCGCCCGATCCGTACCATCGCCACCGCCGTCATCGGCATTGTT 123728 Query 14148 TGTACAGCCAGCGATGCAGATGCCACGCTGTTTCCCCTCAATGAGCCGGTGCTGATTACC 14207 || || | | ||||| || ||||| ||||| || ||||| ||||||||| | || Sbjct 123727 TGCACCGGCGAGGATGCCGACGCCACCCTGTTCCCGCTCAACCGACCGGTGCTGCTGACT 123668 Query 14208 AATGTGCAAAGCGCCATTGCGAAAGCCGGTAAAAAAGGCACGCTGTCTGCTTCCCTGCAG 14267 | |||| | || |||| || || || | ||||| ||| | | ||||| Sbjct 123667 GACGTGCTGGGGGCTATTGGCAAGGCTGGCACCGCCGGCACCCTGCGCCCCACGTTGCAG 123608 Query 14268 GCAATCGCCGACCAGTCAAAGCCTGTCACCGTTGTCGTGCGTGTTGCCGAAGGTACCGGA 14327 || || ||||||||| | || | |||| || || ||||| || ||||| || || Sbjct 123607 GCCATTGCCGACCAGGCTAACGCCATCACGGTCGTGGTGCGCGTGGCCGAGGG---CGTG 123551 Query 14328 GACGACGCAGAAGCGCAGACCACATCCAACATTATCGGCGGCACGGATGAGAACGGTAAG 14387 |||||| ||||| ||||| |||| | || || | ||| | | || | Sbjct 123550 GACGAC-----AGCGCC-ACCACCGCCAATGTCATTGGTAAGAAGGACG-GTGCG--ACC 123500 Query 14388 TACACCGGTATCAAGGCGCTGTTAACTGCCGAAGC---GGTCACCGGTGTTAAGCCGCGC 14444 |||||||| | |||||||| | ||||||| |||| || || |||||| Sbjct 123499 TACACCGGCCTGCAGGCGCTGCTGGTGTCCGAAGCCCAGGTC---GGGGTACGGCCGCGG 123443 Query 14445 ATTCTCGGTGTGCCGGGTCTCGATACGCAGGAGGTTGCAACTGCACTTGCGTCGGTTTGT 14504 || ||||| | |||||| || || || ||| ||| | |||| || || | | Sbjct 123442 ATCCTCGGCGCGCCGGGACTGGACACCCAGCCGGTGACCGCTGCCCTGGCCGTGATCGCC 123383 Query 14505 ATCAGCCTGCGCGCCTTTGGTTATGTCAGCGCATGGGGCTGTAAAACCAT----TTCCGA 14560 | | ||||| ||| | | || |||||| | |||| | | | | |||| Sbjct 123382 AAGAAGCTGCGGGCCATGGCCTACGTCAGCT----GCGCTGCCAGCGCCTCGGTTCCCGA 123327 Query 14561 GGCGATAGCCTATCGTGAGAATTTCAGCCAGCGTGAGTTGATGGTTATCTGGCCTGATTT 14620 ||| || || || || | | | |||||| | || ||| ||||| | ||| || || || Sbjct 123326 GGCCATCGCTTACCGCGCGCAGTTCAGCGACCGCGAGCTGATGTTGCTCTATCCCGACTT 123267 Query 14621 CCTCGCGTGGGACACCGTCAAAAATGCCACCGCAACTGCTTACGCCACTGCGCGTGCACT 14680 | | || | |||||| | | |||||| | || | ||| || || ||||| || Sbjct 123266 CGTGGCCTTCAACACCGCCGATGCGACCACCGGCATGGCCTTCGCAACGGCACGTGCGCT 123207 Query 14681 CGGCCTGCGTGCTTACATCGACCAGACTGTCGGCTGGCACAAAACCCTGTCTAACGTTGG 14740 ||||||||| || ||||| || |||||||| || | ||||| ||||| | Sbjct 123206 CGGCCTGCGCGCCATGATCGATGAGCAGCAAGGCTGGCATAAGTCGCTGTCCAACGTGGC 123147 Query 14741 TGTACAGGGCGTTACCGGCATCAGTGCCTCAGTGTTC--TGGGATTTGCAGGCATCCGGC 14798 ||| ||||| ||||||||||| || || | ||||| |||||| ||||||| Sbjct 123146 CGTAGCCGGCGTGACCGGCATCAG--CCGGGACGTCCATTGGGACCTGCAGG-ATCCGGC 123090 Query 14799 -ACCGATGCTGACCTGCTCAACAAGGCCGGGGTTACGACGCTGGT--ACGCAAGGACGGT 14855 ||||| || | | ||||||| |||| | || |||||| | || | | |||| Sbjct 123089 GACCGACGCCGGCATGCTCAATGCCGCCGATATCACCACGCTGATCAACTCCA--ACGGG 123032 Query 14856 TTCCGTTTCTGGGGTAACCGCACCTGCTCAGATGACCCGCTTTTTCTGTTTGAGAACTAC 14915 | | |||||||| ||||||||| ||||| ||||| ||| || |||| || | Sbjct 123031 TACAAGTTCTGGGGATCGCGCACCTGCAGCGATGAGCCGCTGTTTGCCTTCGAGACCTCC 122972 Query 14916 ACCCGTACCGCGCAGGTACTGGCCGACACGATGGCTGAAGCGCACATGTGGGCGGTCGAT 14975 ||||| || |||||| | ||||||||||| || || || ||||| || ||||| Sbjct 122971 ACCCGCACGGCGCAGATCCTGGCCGACACCATCGCCGAGGCGCAGTTGGTCTACGTCGAC 122912 Query 14976 AAGCCCATTACCGCCACGCTCATTCGTGACATTGTTGACGGCATCAATGCCAAATTCCGC 15035 ||||| | | || |||| | || ||||| | || |||||||| ||||| |||||| Sbjct 122911 AAGCCGCTGCACCCCTCGCTGGTGCGCGACATGCTCGAAGGCATCAACGCCAAGTTCCGC 122852 Query 15036 GAGCTGAAAACAAACGGCTAC---ATCGTGG--ACGGTGAATGCTGGTTCGACGAGGAAT 15090 |||||| | ||| ||| ||| || |||| ||||| |||||||| Sbjct 122851 GAGCTGGTGAACGCCGGATACCTGCTCGGGGCCACGG-----CCTGGTACGACGAGGGCG 122797 Query 15091 CGAAC--GACAAGGAAACCCTGAAAGCCGGGAAACTGTATATCGACTACGACTATACGCC 15148 | ||| | | | | | ||| || ||| ||||||| |||||| || || Sbjct 122796 CCAACCTGCCCACGCA--GCTGTCCAGTGGTCGCCTGGCCATCGACTTCGACTACACCCC 122739 Query 15149 GGTTCCGCCACTGGAGAGCCTGACCCTGCGCCAGCGTATCACCGATAAATATCTGGTGAA 15208 ||| ||||| ||||| | |||| ||| |||||| |||||||| ||| | | | Sbjct 122738 GGTGCCGCCGCTGGAAAACCTGCTGCTGAACCAGCGCATCACCGACCGCTATTTCGCCGA 122679 Query 15209 TCTGGCCGAATCG-GTCAACAGCT-AAGGAGC-CTGA--AA----TAACATGGCACTACC 15259 | | |||| || ||| | ||| | | || |||| || | |||| | | || Sbjct 122678 T-TTCCCGACCCGCATCAGCGGCTGACGCCGCACTGAGGAACCTGTCCCATGTCCATGCC 122620 Query 15260 CCGTAAACTCAAATATCTGAATATGTTCAACGATGGCCTCAGCTACATGGGTGTTGTTGA 15319 | | ||||| || |||| || |||||||||||||| ||||| | || | ||| Sbjct 122619 CAGCAAACTGAAGAATCTCAACCTGTTCAACGATGGCGAGAGCTATCTCGG-CCAGGTGA 122561 Query 15320 ATCCG---TAACGTTGCCGAAGCTGACCCGCAAGCTCGAAAACTATCGCGGCGGCGGTAT 15376 ||| | | | |||||| |||||||||||| | || | || |||| |||||| || Sbjct 122560 --CCGAGTTCAAGCTGCCGACCCTGACCCGCAAGATGGAGGAATACCGCGCCGGCGGCAT 122503 Query 15377 G 15377 | Sbjct 122502 G 122502 Score = 96.9 bits (106), Expect = 7e-16 Identities = 288/438 (66%), Gaps = 20/438 (5%) Strand=Plus/Minus Query 283 TATTCTCAGGCTTGCCGCCCATGAGCTGGAACGGTACGCGGTGCGCATCCATCAGGTCGG 342 |||||| ||| | ||| | ||||| ||| ||||| |||| ||| || |||| Sbjct 137902 TATTCTGCGGCACGATGCCAAGCAGCTGCGGCGGCACGCGCAGCGCCGCCAGCATGTCGT 137843 Query 343 CGGCGC-TGGCTTTTTTGATGTTGAAAAAGTCATCCTTTGTGGCGACCTCGCTCAATGGC 401 || ||| | | ||||||||| || |||||||| | || |||||||||| || Sbjct 137842 CG-CGCGTCACGCCCTTGATGTTGGCGAACTCATCCTTGGCCGCCACCTCGCTCACCGGG 137784 Query 402 ACGATTTTTATGCCGTCCGGTTTCCCGTTCGGTGAGTAGAAAAACAGGTTTTTAAAGTTG 461 | ||| | | ||||| || ||||| || || | | |||||||| |||||| Sbjct 137783 ATGATCTGCAGACCGTCTTTCTTGCCGTTGGGCGAATGCACGAACAGGTTCCGGAAGTTG 137724 Query 462 CCGAGCCCTTTAGAGTTACGCATTG----CATCGCGCAG--CGATTCGACGTCAGTCGCG 515 || | || || ||| ||| | |||||||| || || ||||| | || Sbjct 137723 CCCGGACCAC----GTGCCGCCTTGAGCGCCTCGCGCAGGCCGGTT--ACGTCGGACGA- 137671 Query 516 CTTTGCGCCGGG---TCAGTCACATACATGATGTAACCTGCGTGCGCGCCGTTCTGGTAA 572 || |||| || || |||| || | |||| | || ||||||| |||||| | ||| Sbjct 137670 --TTCCGCCTGGGAATCGGTCAGGTAGAGGATGAAGCCGGCGTGCGAGCCGTTGTTGTAG 137613 Query 573 TACTTGCGGCGGAACAGCGTCGCGGATTCATTCAGCCAGGCGGAATTAAGTGCGCTGAGA 632 |||||||| ||||||||||| || || || || ||| |||| | | || | Sbjct 137612 TACTTGCGCCGGAACAGCGTGGCCGACTCGTTGAGCAGCGCGGCCTGCACGGCCGGCATC 137553 Query 633 TATTCAGGCAGGCCGTAAATCTCCTGATTAATATCAGGCTCCAGCAGGTGGAACACGGTA 692 | || ||||||||||| | |||||| | ||| | |||| |||| ||| |||| Sbjct 137552 CACTCGGGCAGGCCGTACACCTCCTGGTCTGCATCGGACTCCCGCAGCTGGTACACCTGC 137493 Query 693 TCGGGTGCGAATTCATGC 710 ||| | |||||||||| Sbjct 137492 CCGGCCGGGAATTCATGC 137475 >seq353 Length=102661 Score = 143 bits (158), Expect = 5e-30 Identities = 241/344 (70%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 369 AAGTCATCCTTTGTGGCGACCTCGCTCAATGGCACGATTTTTATGCCGTCCGGTTTCCCG 428 || || ||||| | || |||||||||| || | || | |||||||| || || Sbjct 45154 AATTCGTCCTTGGCCGCAACCTCGCTCACCGGGATGAGCTGAATGCCGTCTTTCTTGCCT 45213 Query 429 TTCGGTGAGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCTTTAGAGTTACGCATTGCA 488 ||| | ||| | ||||||||| ||||||||| ||||||| ||||| || ||| Sbjct 45214 GCCGGCGCGTACACAAACAGGTTGCGAAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCG 45273 Query 489 TCGCGCAGCGATTCGACGTCAGTCGCGCTT-TGCGCCGGGTCAGTCACATACATGATGTA 547 |||||| || |||| ||| || ||| ||||||| ||| |||| |||| ||| | Sbjct 45274 GTGCGCAGTGAGTCGATGTCC-TCTTCCTTCTGCGCCGCGTCGGTCATGTACAGAATGAA 45332 Query 548 ACCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTCGCGGATTCATTCAG 607 ||| || || |||||| | ||| |||||||| ||||||||||| ||| || || || Sbjct 45333 ACCGGCATGGCTGCCGTTGTTGTAGTACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAG 45392 Query 608 CCAGGCGGAATTAAGTGCGCTG--AGATATTCAGGCAGGCCGTAAATCTCCTGATTAATA 665 | ||| || |||||| || | || ||||||||||| || ||||| || ||| Sbjct 45393 CAGTGCG--CTTTGCAGCGCTGCCAGCCACTCCGGCAGGCCGTAGATTTCCTGGTTGATA 45450 Query 666 TCAGGCTCCAGCAGGTGGAACACGGTATCGGGTGCGAATTCATG 709 || | ||| ||| |||| | | | | |||| || |||||||| Sbjct 45451 TCGGCCTCGCGCAAGTGGCAGATCGAACCGGGGGCAAATTCATG 45494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95041143378096