Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_021781.2 Length=135281 Score E Sequences producing significant alignments: (Bits) Value seq153 145 7e-30 >seq153 Length=135117 Score = 145 bits (160), Expect = 7e-30 Identities = 617/965 (64%), Gaps = 10/965 (1%) Strand=Plus/Plus Query 99502 AGTGGTATCGTAAACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAG 99561 || || ||| | |||||||| || || | || ||||| ||||| || || ||||| ||| Sbjct 56660 AGCGGCATCCTGAACTGGAATGACATCCCCTACCCGTCCTTCTACCGGGCCTACAAGGAG 56719 Query 99562 TTAACTACAAATTACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTAC 99621 | | || || | |||| | || || || || || |||||| |||| || ||| Sbjct 56720 CTGTCGACCAACTTCTGGATCCCCGACGAAGTGGACATGAAGGGCGACGCGCGCGGCTAC 56779 Query 99622 AACCACTT--ATCCGAAGAAGAGAAGTATGCGTTTGACTCCATTATCGGACTTTTAGCTA 99679 | | || || || ||| |||| | || || || ||||| || | || | Sbjct 56780 GGTGAGCTCAATGCGCGC--GAAAAGAATGCCTACGATTCGATCATCGGCCTGCTGGCCA 56837 Query 99680 CACTTGACTCACCCCAAACACGTTTTATTTATAACATTGCAGAGTATGTCAGTGATGCCT 99739 | || ||||| || || || || || || || ||| | || ||||| ||| || | Sbjct 56838 CGCTCGACTCGCCGCAGACCCGCTTCATCTACAACGTGGCCGAGTACATCACCGACCCGG 56897 Query 99740 CCGTTCATGCTATTACAGCTATCATTGCACAACAAGAAGCTATTCATAATGAGAGTTATT 99799 ||| ||||| | | || ||||| | || || || | || || || ||||| || Sbjct 56898 CCGCGCATGCCAACGCCGCGATCATCGGCCAGCAGGAGGTGATCCACAACGAGAGCTACA 56957 Query 99800 CTTATGTACTTGCTTCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTA 99859 || ||||| ||||| || | | || ||||| || || || || || Sbjct 56958 GCTACGTACTGGCTTCCATCGCCGGGCTGGCCGACCAGAACCGCGTGTTCGAAATCGCCC 57017 Query 99860 GAACACACCCTACGATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCA 99919 | || || || || || | || || || || ||| |||| || ||||| |||| Sbjct 57018 GCACGCATCCCACCATCCTGGCGCGCAACCAGCCGATCATGCAGTCCTACGACGACTTCA 57077 Query 99920 TGAATAACAAAACACCTGAGAATATGGTAAAAGCTTTAGTACAGTCATCTATCTTAGAGG 99979 || | || || | |||| || | | | | ||||| || ||| | || | Sbjct 57078 TGCGCGAGAAGACCGCCGAGACCCTGATCCGGTCGCTGATCCAGTCGTCGATCCTGGAAG 57137 Query 99980 GTATTAATTTCTACAGCGGTTTTGCTTACTTCTACAACCTCGTTCGTCAAAACAAGATGA 100039 | || || ||||| ||| || || | ||||||||||| || || || ||| |||| Sbjct 57138 GCATCAACTTCTATTCCGGCTTCGCGTTTTTCTACAACCTGGTCCGCCAGAACCGCATGA 57197 Query 100040 CGGGGACAGGTAAAATCATTAGCTTCATTAATCGTGATGAATTAGCCCATTCGAAATTTA 100099 | || || || || ||||| |||||||| || || || ||| | ||||| | || || | Sbjct 57198 CCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAACTGGCCCACACCAAGTTCA 57257 Query 100100 TTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAA 100159 | || || || | || || | || || |||| | || || || | || | Sbjct 57258 TCAGCGAACTGATCCGCGCCATCATCGGCGAGAACCAGCAGCTTCAGGGCGACCAGCTCA 57317 Query 100160 ATGACTACGTGTACGCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGT 100218 | |||||| ||| | | || |||||| | | ||| ||| | ||| ||| | | Sbjct 57318 CCGCTTACGTGCACGATGCATTCGAGCATGCCATCGCGCTGGAA-ACGCGCTGGACCGGC 57376 Query 100219 GAGGTACTACAAGGCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATAT 100278 ||||| || | ||||| || || || || ||||| || ||| | ||| || || || Sbjct 57377 GAGGTGCTGGACGGCATCGACGGCATCGACGTGGACGAGATGATCCGCTACGTGAAGTAC 57436 Query 100279 CGTGCTAATAAAATGTTAGGGATGTTAGGTCTTCAACCAA-TGTATCAAGGTCACACA-G 100336 || || || || ||| || ||| | || | || | | |||| || | ||| | | Sbjct 57437 CGCGCCAACAAGATGGCCGGCATGCTCGG-CATCGAGAAGCTGTA-CAGCGACACCAACG 57494 Query 100337 AAAATTCTATGACATGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGACT 100396 || ||| | ||||| || || || ||||| || || || || || || ||||||| Sbjct 57495 TCAACGTGATGCCGTGGATCAAGGCCTATGCCGACAATTTCACCGAGACCAAGACCGACT 57554 Query 100397 TTTTCGAAATGCGTAATTCTAGTTACAAGAAAACAAATTTAGACAATGGGTTCGATGACT 100456 | ||||| ||||| || | ||||||||||| || |||| ||||| || ||||| ||| Sbjct 57555 TCTTCGAGATGCGCAACGCCAGTTACAAGAAGACCAATTCGGACAACGGCTTCGACGACC 57614 Query 100457 TATGA 100461 | ||| Sbjct 57615 TGTGA 57619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432719930878774