Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_022060.1 Length=54314 Score E Sequences producing significant alignments: (Bits) Value seq2504 98.7 3e-16 >seq2504 Length=31563 Score = 98.7 bits (108), Expect = 3e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 36418 TGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGGAGTAAACGCGAAACCCGCA 36477 ||||| ||| ||| || ||| |||||||||||| ||||| | | ||| ||| Sbjct 30822 TGCTCGCAGACCGACCCGGAGGCGTTCTTCCCCGAGAAGGGTGGATCGACGAGGGACGCC 30881 Query 36478 AAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATGCCTTCAGTGGGCGCTGGACAAC 36537 |||||||||||| |||||||||||| | || ||||| | | || || ||||| Sbjct 30882 AAGCGGATCTGCACGTCGTGCGACGTCCGCGGGGAGTGCCTGGAATACGCTCTCAACAAC 30941 Query 36538 AACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGTGAACGCCG 36584 | || | ||||||||||| || |||||||||||||| || ||||| Sbjct 30942 GATGAGCGGTTCGGCATCTGGGGTGGCCTGTCCGAGCGCGAGCGCCG 30988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173661900686424