Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq8755 167 2e-36 seq64 125 5e-24 seq5676 122 6e-23 seq8759 120 2e-22 seq355 114 9e-21 seq1668 87.8 1e-12 seq4407 86.0 4e-12 seq59 84.2 2e-11 >seq8755 Length=560 Score = 167 bits (184), Expect = 2e-36 Identities = 210/286 (73%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 95494 GTTGACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGAT-GGCAC 95552 || ||| ||||| || || |||||| | ||| |||||||| || ||| | ||| Sbjct 299 GTCGACAACCGCCGAGATTTCCTCGTCGGTGATGAACGCGCCCTGCATACGGGTCGGCTT 240 Query 95553 CCCGCGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCAC 95612 || ||| |||| ||||||||| | ||||||||||| || ||||||| |||||| || Sbjct 239 ACC-CGCGCCCATGGGCAGGAACAGGCCGTCACCCATACCGATGAGCTTCTCGGCGCCGG 181 Query 95613 CCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACG 95672 || || ||||| || || || || ||||| | || ||||||| || | || | Sbjct 180 GCTGATCGAGGATGACTCGCGAGTCCGTCAGTGAAGACGTCGCGAACGCCAGACGCGAAG 121 Query 95673 GCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGA 95732 ||||||||| ||||| ||||| ||||| || || ||||| || |||||||| ||||| | Sbjct 120 GCACGTTGGTCTTGATCAGGCCGGTGACGACGTCGACGGACGGGCGCTGCGTTGCCAGCA 61 Query 95733 CGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT 95778 | || || || ||||| || || || ||||| | ||||||||| || Sbjct 60 CCAGGTGGATACCGGCAGCACGGGCTTTCTGCGTGATGCGGACGAT 15 >seq64 Length=260832 Score = 125 bits (138), Expect = 5e-24 Identities = 143/188 (76%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||| | ||||| ||||| ||||| |||| || |||||| ||| || ||||||||||| Sbjct 1263 CGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACGCTGGGGCGTTGCGTCGCCAG 1322 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCG 95788 || | ||| |||||||| || |||||||||||||| | |||| | || ||| | ||| Sbjct 1323 GATCAAATGGATGCCGGCCGCACGCGCCTTCTGGGCCAGGCGGGCGATCAGTT--CTTCG 1380 Query 95789 ACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATG 95848 | || |||||| | ||||||| ||||| ||||||||||||| || ||||||||| Sbjct 1381 A--TC-TTCTTGCCCACCACCATCATCAGGTCGGCCAGCTCGTCGATGACCACCACGATG 1437 Query 95849 TAGGGGAG 95856 ||| || Sbjct 1438 GTGGGCAG 1445 Score = 100 bits (110), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 95960 TCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATC 96019 || || ||||||||| || ||||| || || || | ||| | | | ||| | |||| Sbjct 1636 TCCGTAACCACCGGCGCCAGCAGGTGCGGAATGCCTTCGTAGACGCTCATTTCGAGCATC 1695 Query 96020 TTCGGGTCGATCATGATGA-GCTTGACCCGATCAGGATT-GGCTCGGTAGAGCATGGAAA 96077 ||||||||||||| ||| | || | | ||| | ||| |||||||| || | Sbjct 1696 TTCGGGTCGATCAGGATCACGCGCGTGTGGG--AGGCGTCGGCCTTGTAGAGCAGCGACA 1753 Query 96078 CCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGT 96137 | ||| | |||||| | |||||||||||| ||||| | ||| ||||||||||||| Sbjct 1754 GGATCATGGCGTTGATCCCGACGGACTTGCCCGAGCCGGTCGTGCCCGCCACCAGCAGGT 1813 Query 96138 GGGGCATTTTGGCCAGGT 96155 ||||||| |||||||||| Sbjct 1814 GGGGCATCTTGGCCAGGT 1831 >seq5676 Length=789 Score = 122 bits (134), Expect = 6e-23 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 95981 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 96040 ||||| |||||||| | ||| || ||||| || |||||||| |||||||| | ||| | | Sbjct 70 AGGTGCGGGATACCTTCGTACGGCGTGAGCTCGACCATCTTGGGGTCGATGAGGATCATC 129 Query 96041 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 96100 || || || | |||||| ||||| || || ||||||||||| | |||||| Sbjct 130 CGTACTTCTTCCGGCGTTGCTCGGGTGAGCAACGAGACGAGCATCGAGTTCACGAAGCTC 189 Query 96101 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGTTC 96157 ||||| || || ||||||| || |||||||| || || ||||| || || |||||| Sbjct 190 GACTTACCGGAGCCGGTGGAACCTGCCACCAGGAGATGCGGCATCTTCGCGAGGTTC 246 >seq8759 Length=471 Score = 120 bits (132), Expect = 2e-22 Identities = 149/202 (74%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 95653 GGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGA 95712 |||||| | || | |||||| ||||| | ||||| || || ||||| || || ||| Sbjct 14 GGCGAAGGCCAGTCGAGACGGGACGTTCGCCTTGATGAGTCCGGTGACGACGTCGACGCT 73 Query 95713 GGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCG 95772 |||||||| ||||| |||||||| || ||||||| || ||||| ||| | |||||| Sbjct 74 CGGCCGCTGGGTCGCGAGGACGAGGTGGATGCCGGAGGCTCGCGCGAGCTGCGTGATGCG 133 Query 95773 GACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTC 95832 || || | |||| || || | | || | ||||||||||||| || |||||||| Sbjct 134 CACGATCGAGTCCTCCACGTCG--CGAGGGGC-GACCATCATGAGGTCGGCGAGCTCGTC 190 Query 95833 GACCACTACCACGATGTAGGGG 95854 |||||| |||| || ||| ||| Sbjct 191 GACCACGACCAGGAGGTACGGG 212 >seq355 Length=98473 Score = 114 bits (126), Expect = 9e-21 Identities = 233/338 (69%), Gaps = 15/338 (4%) Strand=Plus/Minus Query 95517 CGTCGGATACGAAAGCGCCCTGTATCCGGAT-GGCACCCCGCGCCCCCACGGGCAGGAAT 95575 ||||||| ||||| ||||| || | ||||| |||| | | ||| ||| || | | Sbjct 86502 CGTCGGAGACGAACGCGCCGTGAACACGGATCGGCAAACTGGTGCCCGGCGG-CATGTAG 86444 Query 95576 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTCGTCCAGGATCACCCGGCTA 95635 | | |||||| |||| || |||||||| || |||| ||| | ||| |||| | Sbjct 86443 AGCATGTCACCGTGGCCCAGCAGTTGCTCGGCGCCGCCCTGGTCGATGATGGTCCGGGAA 86384 Query 95636 TCGGT---GAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGG 95692 ||| | | || | ||| |||| | | | ||| | ||||| ||||| ||| Sbjct 86383 TCGATCTTGCTCGACACC-TGG--AACGCCATGCGGGTCGGGATGTTGGCCTTGATCAGG 86327 Query 95693 CCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCTGCG 95752 || |||| || ||||| || || ||||| ||||| |||| | || || ||||| || Sbjct 86326 CCGGTGATCACGTCCACCGACGGACGCTGGGTCGCGAGGATCAAGTGGATCCCGGCGGCC 86267 Query 95753 CGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCGACTTCTTTCTTGTAGCCGCCCA 95810 ||||||||||||||||| ||| | || ||| | |||| | |||||| | || || Sbjct 86266 CGCGCCTTCTGGGCGATACGGGCGATCAGTT--CTTCGA---CCTTCTTGCCGACGATCA 86212 Query 95811 TCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATG 95848 |||| | ||| || | ||||||||||| ||||||||| Sbjct 86211 TCATCATGTCGGCAAATTCGTCGACCACCACCACGATG 86174 >seq1668 Length=11891 Score = 87.8 bits (96), Expect = 1e-12 Identities = 226/342 (66%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 98032 TCGGCATTGAGGTAGTACGGGCGATCCAGCAGGATCGGGTCAACCTCGCCGGCCGGCACG 98091 |||| | |||||||||||| || || || | |||| |||| ||| |||||| Sbjct 3741 TCGGGTTCGAGGTAGTACGGCTTGTCGAGGGTGAGCAGGTCGACCTGCTCGGAGGGCACG 3800 Query 98092 AACTCCACAACGTCAATCACCTTGTTGGTTTCGCTGGGCAGCTCTGCCAAGTCCTCATTG 98151 ||||| || ||||| ||| || | | | || ||| || | || | ||| || || Sbjct 3801 AACTCGACGACGTCGATCTCCCGGCTCTTCTCCGCGGGGAGGGCGGCGAGGTCGTCCTTC 3860 Query 98152 GTCAGTAGGGCGGTTTGCCCGTCGACCTCGAACACCTTGCCCAGATCGGCCGTGTGGACC 98211 ||||| | | |||| || || ||| | || | | | | | ||||| || | | Sbjct 3861 GTCAGCACGACGGTCTGGCCTTCGTCGACGTAGGCGCGGTCGATGTCGGC-GTACGCCAC 3919 Query 98212 TG-CTCCCCACACGTCTCACAGACCTTGTGGTAGCGAATCCGCCCGCCGTCCTGGACGTG 98270 | ||| || || || ||| || ||||| || ||||||||||||| |||| Sbjct 3920 GGTCTCTCCGCAGACTTCGCAGGTGCGCTGATAGCGGATGCGCCCGCCGTCCTTCTCGTG 3979 Query 98271 CGCCAGATGGCCCTTCAGGTCGTGTTCCTCGGTGGCCGCGTACATCTTCACCGGCACGTT 98330 | || |||| | || |||||| |||||||| || | ||||| ||| |||||||| || Sbjct 3980 CACCTGATGCAGCGGCACGTCGTGGTCCTCGGTCGCGGAGTACACCTTGACCGGCACATT 4039 Query 98331 GACCAACCCGAAGTTGACCGCGCCTGTCCAAACCGCTCTCAT 98372 || | |||||| | | ||||| |||| | || ||||| Sbjct 4040 CACGAGCCCGAACGTCAGTGCGCCCTTCCAGATCGTCCTCAT 4081 >seq4407 Length=7959 Score = 86.0 bits (94), Expect = 4e-12 Identities = 187/279 (67%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 95872 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCC---ACGGTGAG 95928 || |||||||||| | | ||||| ||||| ||||| ||||||||| ||||| Sbjct 276 GTTGCGCACGCCGACCTTGGACATCTTGCGGTAGCGGTCTTCCATCTCCTTGACGGT--- 220 Query 95929 CCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGG 95988 ||| ||||| || |||| | || ||||| || || ||| | || || || Sbjct 219 CCATTTCAGCGCTACGACGGCCTTCTTCGGATCGGTCACGACGGGCGTGAGCAGATGCGG 160 Query 95989 GATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCG 96048 || |||| || | ||||||| ||||||||| ||||||||||| || | | | Sbjct 159 AATGCCGTCATAGATCGACAGTTCCAGCATCTTCGGATCGATCATGATCAGGCGGCACTG 100 Query 96049 ATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCC 96108 || || | ||||| |||| || | | ||| | ||||||| ||| || || Sbjct 99 TTCCGGGGTCATGCGGTAAAGCAGCGACAGGATCATGGTGTTGATGGCAACGGATTTACC 40 Query 96109 CGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTT 96147 ||| ||||||| || || |||||||| || ||||| || Sbjct 39 CGAGCCGGTGGTACCTGCAACCAGCAGATGCGGCATCTT 1 >seq59 Length=142688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/180 (71%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736 ||||| ||||| ||||| |||| || ||||| || || ||||| || ||||||| || Sbjct 115936 GTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGGCGCTGGGTGGCCAGGATCAG 115877 Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95796 || |||||||| || ||||||||||| || | || | ||| | |||| | || Sbjct 115876 GTGGATGCCGGCCGCACGCGCCTTCTGCGCCAAACGTGCGATGAGCTCTTCGA---CCTT 115820 Query 95797 CTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGGAG 95856 |||| | || |||||| | ||| || | ||||||| | | ||||||| | || || Sbjct 115819 CTTGCCGACGATCATCATCATGTCGGCGAATTCGTCGATGAAGATCACGATGAACGGCAG 115760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351702928987487