Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq154 120 3e-22 >seq154 Length=55709 Score = 120 bits (132), Expect = 3e-22 Identities = 220/320 (69%), Gaps = 7/320 (2%) Strand=Plus/Minus Query 143822 TTCATCGACTACCAAGGCCACGACTTCTCCTTCCGTGGTATGAGCGGGTGGCATGACGCG 143881 ||| || ||| ||||||||||||||||| | || || ||| ||| | | ||||| Sbjct 9999 TTCGTCAACTGGCAAGGCCACGACTTCTCGATGCGCGGCATGTCCGGCCTGTACGACGCC 9940 Query 143882 GCGTCTTCCGGTTCTGGCCATCTGGTGTTCTTCAAAGGCACCGACACCAACCCTGCTCTG 143941 ||| | || || || ||| |||| ||||||||||||| ||| || | Sbjct 9939 CGCAAGAGCGGCGCGGGTCACTTGCTGTCGTTCACCGGCACCGACACCATCCCGGCCATT 9880 Query 143942 GACTTCGTTGAAGAGTATTATGGCGCGGATATCGATGAAGACTATGTCGTTGCTGGCTCT 144001 || | | | ||||| || ||||||||| |||| || ||| | ||||| Sbjct 9879 GATTACCTGGAAGACCTGTACGGCGCGGATTCCGATCGCGAACTGATCGGAG---GCTCT 9823 Query 144002 GTTGCAGCCACCGAACACGCCGTGATGTGCATGGGCACGAAGGATGGCGAGTTCGAAACC 144061 ||| | |||||||||||| | || |||||| |||||| ||||| ||||| |||||||| Sbjct 9822 GTTCCCGCCACCGAACACTCGGTCATGTGCCTGGGCAGCAAGGAAGGCGAAATCGAAACC 9763 Query 144062 TTCGAGCGCCTGATCTCTAAAGTCTATCCGGACGGGAT--TGTCAGTATCGTTTCTGATG 144119 || |||||| || | | |||||||||| ||| || |||| | | || || ||| Sbjct 9762 ATCCGCCGCCTGGTCACCCAGGTCTATCCGGCCGGCATCGTGTCGG--TGGTGTCCGATA 9705 Query 144120 CATGGGATTACTGGCAGGTC 144139 | ||||| | |||||| ||| Sbjct 9704 CCTGGGACTTCTGGCAAGTC 9685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511777127440920